- Transcript 'KH2012:KH.C6.283.v1....' >
- Transcript 'KH2012:KH.C4.584.v1....' >
- Transcript 'KH2012:KH.C12.387.v1...' >
- Transcript 'KH2012:KH.C12.265.v1...' >
- Transcript 'KH2012:KH.L131.2.v1....'
Transcript Model
Transcript Id
KH2012:KH.L131.2.v1.A.ND1-1
Possible name(s)
TOP1; TOP1MT
Gene model
Location
KhL131 [66,354 / 71,907]
Amino acid sequence
Length: 709
>KH.L131.2.v1.A.ND1-1
PASGWYNLVVIIIKMEVTSSQNGFNSESPQNHKSNKTREHKKKKKYVLGSDGKPKLGPDG
RPIRIKSEHKLKKQINHTGDAIQIKKEKPEIVSPKAEKRRSDCEAVEKLKKKIKKEKHAE
KRKHDSDQEIRQKKKKIVKQEIESPTKVKKEKKEEGDDKWKWWEEKGNEKDSGIKWKFLE
HKGPVFAPPYEPLPSSVLFKYDGKPMKLSLEAEEVMTFYAKMLDHEYVMNKQERSTITDL
GKCNFRDVCSYFQQKSEERKARSKEEKQEEKKKNEALIEEFGFCDWDGHREKIGNFRLEP
PGLFRGRGNHPKMGKLKKRIIPENITINCSKNSKIPKPPAGHKWKEVRHDNAVTWLVSWT
ENVQNQNKYIMLNPSSRVKGEKDWQKYEVARNLKSKVDRIREDYMRDLKSDEMMVRQRAV
ALYFIDKLALRAGNEKEDGESADTVGCCSLRCEHIKLHKHLDGKDFIVEFDFLGKDSIRY
YNKVPVLKQVFKNLVLFTENKEGPDDLFDRLNTSTLNKYLNSLMDGLTAKVFRTYNASIT
LLNQLLELTDPDDENVASKILSYNRANRAVAVLCNHQRAAPKNFSEQMGRMNEKIEKKQR
DIQDAKQETKSAKSDYKHNKSEAKRKAYEGKKKKVERLQEQLIKLEVQATDKEENKEIAL
GTSKLNYLDPRITVAWCKKYSVPIEKCYNKTQRDKFAWAIAMVDDTYVF
Nucleotide sequence
Length: 2,638
>KH2012:KH.L131.2.v1.A.ND1-1
CCTTTCCAAATTAATTTAATGTTTTCGGGGTCTTTTCGATAAAACTGTAAAAGAATCTTT
TGGCTTTTCAAATGGCGTCGTGGTCGAAAAAGAAAGAAGTTGCCGCGCATGCGCAGTAGC
GAATCTACGGACTTGTTCTTTGTGCGAGTCTGCCATTACGTTGTTGCTTGCGTCAAAGTA
TTTGTTGCATAAAACTATCTTTAGCCAGCGTCTGGTTGGTATAATTTGGTTGTAATTATA
ATAAAAATGGAAGTGACTTCGTCACAAAATGGTTTCAACAGCGAATCTCCTCAAAATCAC
AAAAGCAACAAGACCAGGGAACATAAAAAAAAGAAAAAGTATGTCTTGGGTTCGGATGGT
AAACCGAAGCTTGGACCAGACGGTCGACCGATAAGAATCAAATCGGAACATAAACTTAAG
AAACAAATCAATCATACTGGAGACGCAATTCAAATCAAAAAAGAAAAACCAGAAATAGTT
TCTCCAAAAGCCGAAAAAAGAAGATCGGATTGTGAGGCGGTTGAAAAACTCAAAAAGAAA
ATAAAGAAAGAGAAACACGCTGAAAAAAGAAAACACGATTCTGACCAAGAAATTCGACAG
AAAAAGAAGAAAATTGTGAAACAAGAAATTGAAAGCCCAACAAAAGTGAAGAAAGAGAAG
AAAGAAGAAGGAGATGATAAATGGAAATGGTGGGAAGAGAAAGGGAATGAAAAAGATAGC
GGAATTAAATGGAAGTTTCTTGAACATAAGGGACCTGTGTTTGCTCCTCCGTATGAACCA
TTGCCGTCATCTGTATTGTTTAAGTACGACGGTAAACCAATGAAGTTAAGTTTAGAGGCC
GAGGAAGTGATGACGTTTTACGCTAAAATGCTAGATCACGAATATGTGATGAATAAACAG
GAACGTTCAACAATCACAGACCTCGGGAAATGTAATTTTCGAGATGTTTGTTCGTATTTT
CAACAAAAGTCAGAAGAGAGAAAAGCGAGGTCTAAGGAGGAGAAACAAGAGGAAAAAAAG
AAGAACGAAGCTTTGATCGAAGAGTTTGGGTTTTGCGATTGGGACGGACATCGTGAGAAG
ATCGGAAACTTTCGGTTGGAACCCCCAGGGTTATTTAGGGGGCGGGGGAATCACCCAAAG
ATGGGTAAACTGAAGAAACGGATTATTCCCGAGAATATTACAATAAACTGCAGCAAAAAC
TCCAAGATACCAAAGCCACCCGCTGGTCATAAGTGGAAGGAAGTTCGTCATGACAACGCT
GTGACGTGGTTAGTGTCGTGGACCGAGAATGTTCAGAACCAGAATAAATACATCATGTTA
AACCCCAGCTCCAGAGTCAAGGGAGAAAAAGATTGGCAGAAATACGAAGTAGCACGTAAT
TTGAAATCCAAAGTTGATCGTATACGTGAGGATTATATGAGAGATTTGAAAAGCGACGAG
ATGATGGTTCGGCAACGTGCTGTCGCGTTGTATTTTATTGATAAATTGGCGTTGAGAGCA
GGCAATGAGAAAGAGGACGGAGAGTCAGCTGACACGGTCGGTTGCTGTTCGCTTAGGTGC
GAACATATCAAACTTCATAAACACCTGGATGGGAAAGACTTCATTGTCGAGTTTGATTTC
TTGGGAAAAGATTCGATTCGATATTATAATAAAGTGCCTGTGCTTAAACAGGTTTTCAAG
AACCTCGTTTTATTCACGGAAAACAAAGAAGGACCCGATGATTTGTTCGATCGCTTGAAT
ACATCCACGTTGAACAAATACCTCAATTCGCTCATGGATGGGTTGACGGCCAAAGTTTTC
CGAACTTACAACGCTTCAATTACTTTGCTAAACCAACTGCTGGAACTAACTGATCCCGAT
GACGAAAACGTTGCATCGAAAATCTTGTCGTACAATCGTGCCAACCGTGCTGTGGCAGTT
TTGTGCAACCATCAGCGTGCGGCACCAAAGAACTTTAGCGAACAAATGGGAAGAATGAAT
GAAAAGATTGAAAAGAAACAGCGGGACATTCAAGATGCAAAGCAAGAAACAAAAAGCGCA
AAATCTGATTATAAACATAATAAAAGTGAAGCAAAGAGAAAAGCTTACGAAGGAAAAAAG
AAAAAAGTTGAAAGATTGCAGGAACAACTAATTAAACTGGAAGTTCAAGCTACGGATAAA
GAGGAAAACAAAGAGATTGCTTTAGGAACTTCAAAACTAAATTATCTTGACCCAAGGATT
ACTGTTGCGTGGTGCAAAAAGTACAGCGTCCCGATTGAGAAATGCTACAACAAAACTCAA
CGCGATAAATTTGCGTGGGCGATCGCTATGGTTGACGACACATATGTGTTTTAGTGTGAC
GTCAAAATAAAGTTTATTTGCAGCATTTTACGTCACAATGCATTTTAATATTGCAACAAT
GGTTTTGTTGTTTTAAAGGAATTTACTTTAAATTAATTACGTATGATGTCATAATGAACA
AAACAATATTATGACATCACAAAGTTGTTGCTTTTGGAATATTTTATTAACTGTTTTAAC
CTTGTGATGCAATAGTGGGGTATTGTCACAATCATTTTACGATTGTTATGAACAGTGACG
TAACAATAGGCAATTATCCGTGGTCCTGTATATAAATACAATTGTGATCTTATAGTAA
| PANTHER |
TopoI (IPR001631) - T[21-709] 8.4E-291 |
| SUPERFAMILY |
TopoI_DNA-bd_euk_N_sf (IPR036202) - T[159-373] 1.1E-91 |
| Gene3D |
DNA_topo_DNA_db_N_dom2 (IPR013030) - T[161-190] 2.2E-82 - T[263-372] 2.2E-82 |
| Pfam |
TopoI_DNA-bd_euk (IPR008336) - T[174-372] 5.4E-81 |
| Gene3D |
DNA_topo_DNA_db_N_dom1 (IPR013034) - T[191-262] 2.2E-82 |
| PRINTS |
TopoI (IPR001631) - T[303-312] 3.5E-51 - T[417-436] 3.5E-51 - T[441-455] 3.5E-51 - T[468-484] 3.5E-51 - T[526-540] 3.5E-51 - T[661-672] 3.5E-51 |
| SMART |
TopoI_euk (IPR013499) - T[303-681] 4.1E-241 |
| SUPERFAMILY |
DNA_brk_join_enz (IPR011010) - T[375-584] 2.83E-87 - T[656-708] 2.83E-87 |
| Gene3D |
TopoI_cat_a-hlx-sub_euk (IPR014711) - T[375-529] 3.7E-63 |
| Pfam |
TopoI_cat_euk (IPR013500) - T[375-608] 3.4E-97 |
| CDD |
TopoI_cat_euk (IPR013500) - T[381-583] 3.43336E-79 |
| Gene3D |
TopoI_cat_a/b-sub_euk (IPR014727) - T[530-709] 4.0E-70 |
| Pfam |
TopoI_C_dom (IPR025834) - T[640-709] 1.5E-32 |
| ProSitePatterns |
TopoI_AS (IPR018521) - T[654-672] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOP1_HUMAN | 68.897 % | 776 | 0 |
| TOP1M_HUMAN | 60.746 % | 712 | 0 |