- Transcript 'KH2012:KH.L40.23.v1....' >
- Transcript 'KH2012:KH.L172.26.v1...' >
- Transcript 'KH2012:KH.C10.596.v1...' >
- Transcript 'KH2012:KH.C3.199.v2....' >
- Transcript 'KH2012:KH.L131.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.L131.2.v2.A.SL2-1
Possible name(s)
TOP1; TOP1MT
Gene model
Location
KhL131 [66,691 / 71,907]
Amino acid sequence
Length: 707
>KH.L131.2.v2.A.SL2-1
SGWYNLVVIIIKMEVTSSQNGFNSESPQNHKSNKTREHKKKKKYVLGSDGKPKLGPDGRP
IRIKSEHKLKKQINHTGDAIQIKKEKPEIVSPKAEKRRSDCEAVEKLKKKIKKEKHAEKR
KHDSDQEIRQKKKKIVKQEIESPTKVKKEKKEEGDDKWKWWEEKGNEKDSGIKWKFLEHK
GPVFAPPYEPLPSSVLFKYDGKPMKLSLEAEEVMTFYAKMLDHEYVMNKQERSTITDLGK
CNFRDVCSYFQQKSEERKARSKEEKQEEKKKNEALIEEFGFCDWDGHREKIGNFRLEPPG
LFRGRGNHPKMGKLKKRIIPENITINCSKNSKIPKPPAGHKWKEVRHDNAVTWLVSWTEN
VQNQNKYIMLNPSSRVKGEKDWQKYEVARNLKSKVDRIREDYMRDLKSDEMMVRQRAVAL
YFIDKLALRAGNEKEDGESADTVGCCSLRCEHIKLHKHLDGKDFIVEFDFLGKDSIRYYN
KVPVLKQVFKNLVLFTENKEGPDDLFDRLNTSTLNKYLNSLMDGLTAKVFRTYNASITLL
NQLLELTDPDDENVASKILSYNRANRAVAVLCNHQRAAPKNFSEQMGRMNEKIEKKQRDI
QDAKQETKSAKSDYKHNKSEAKRKAYEGKKKKVERLQEQLIKLEVQATDKEENKEIALGT
SKLNYLDPRITVAWCKKYSVPIEKCYNKTQRDKFAWAIAMVDDTYVF
Nucleotide sequence
Length: 2,430
>KH2012:KH.L131.2.v2.A.SL2-1
CGTCTGGTTGGTATAATTTGGTTGTAATTATAATAAAAATGGAAGTGACTTCGTCACAAA
ATGGTTTCAACAGCGAATCTCCTCAAAATCACAAAAGCAACAAGACCAGGGAACATAAAA
AAAAGAAAAAGTATGTCTTGGGTTCGGATGGTAAACCGAAGCTTGGACCAGACGGTCGAC
CGATAAGAATCAAATCGGAACATAAACTTAAGAAACAAATCAATCATACTGGAGACGCAA
TTCAAATCAAAAAAGAAAAACCAGAAATAGTTTCTCCAAAAGCCGAAAAAAGAAGATCGG
ATTGTGAGGCGGTTGAAAAACTCAAAAAGAAAATAAAGAAAGAGAAACACGCTGAAAAAA
GAAAACACGATTCTGACCAAGAAATTCGACAGAAAAAGAAGAAAATTGTGAAACAAGAAA
TTGAAAGCCCAACAAAAGTGAAGAAAGAGAAGAAAGAAGAAGGAGATGATAAATGGAAAT
GGTGGGAAGAGAAAGGGAATGAAAAAGATAGCGGAATTAAATGGAAGTTTCTTGAACATA
AGGGACCTGTGTTTGCTCCTCCGTATGAACCATTGCCGTCATCTGTATTGTTTAAGTACG
ACGGTAAACCAATGAAGTTAAGTTTAGAGGCCGAGGAAGTGATGACGTTTTACGCTAAAA
TGCTAGATCACGAATATGTGATGAATAAACAGGAACGTTCAACAATCACAGACCTCGGGA
AATGTAATTTTCGAGATGTTTGTTCGTATTTTCAACAAAAGTCAGAAGAGAGAAAAGCGA
GGTCTAAGGAGGAGAAACAAGAGGAAAAAAAGAAGAACGAAGCTTTGATCGAAGAGTTTG
GGTTTTGCGATTGGGACGGACATCGTGAGAAGATCGGAAACTTTCGGTTGGAACCCCCAG
GGTTATTTAGGGGGCGGGGGAATCACCCAAAGATGGGTAAACTGAAGAAACGGATTATTC
CCGAGAATATTACAATAAACTGCAGCAAAAACTCCAAGATACCAAAGCCACCCGCTGGTC
ATAAGTGGAAGGAAGTTCGTCATGACAACGCTGTGACGTGGTTAGTGTCGTGGACCGAGA
ATGTTCAGAACCAGAATAAATACATCATGTTAAACCCCAGCTCCAGAGTCAAGGGAGAAA
AAGATTGGCAGAAATACGAAGTAGCACGTAATTTGAAATCCAAAGTTGATCGTATACGTG
AGGATTATATGAGAGATTTGAAAAGCGACGAGATGATGGTTCGGCAACGTGCTGTCGCGT
TGTATTTTATTGATAAATTGGCGTTGAGAGCAGGCAATGAGAAAGAGGACGGAGAGTCAG
CTGACACGGTCGGTTGCTGTTCGCTTAGGTGCGAACATATCAAACTTCATAAACACCTGG
ATGGGAAAGACTTCATTGTCGAGTTTGATTTCTTGGGAAAAGATTCGATTCGATATTATA
ATAAAGTGCCTGTGCTTAAACAGGTTTTCAAGAACCTCGTTTTATTCACGGAAAACAAAG
AAGGACCCGATGATTTGTTCGATCGCTTGAATACATCCACGTTGAACAAATACCTCAATT
CGCTCATGGATGGGTTGACGGCCAAAGTTTTCCGAACTTACAACGCTTCAATTACTTTGC
TAAACCAACTGCTGGAACTAACTGATCCCGATGACGAAAACGTTGCATCGAAAATCTTGT
CGTACAATCGTGCCAACCGTGCTGTGGCAGTTTTGTGCAACCATCAGCGTGCGGCACCAA
AGAACTTTAGCGAACAAATGGGAAGAATGAATGAAAAGATTGAAAAGAAACAGCGGGACA
TTCAAGATGCAAAGCAAGAAACAAAAAGCGCAAAATCTGATTATAAACATAATAAAAGTG
AAGCAAAGAGAAAAGCTTACGAAGGAAAAAAGAAAAAAGTTGAAAGATTGCAGGAACAAC
TAATTAAACTGGAAGTTCAAGCTACGGATAAAGAGGAAAACAAAGAGATTGCTTTAGGAA
CTTCAAAACTAAATTATCTTGACCCAAGGATTACTGTTGCGTGGTGCAAAAAGTACAGCG
TCCCGATTGAGAAATGCTACAACAAAACTCAACGCGATAAATTTGCGTGGGCGATCGCTA
TGGTTGACGACACATATGTGTTTTAGTGTGACGTCAAAATAAAGTTTATTTGCAGCATTT
TACGTCACAATGCATTTTAATATTGCAACAATGGTTTTGTTGTTTTAAAGGAATTTACTT
TAAATTAATTACGTATGATGTCATAATGAACAAAACAATATTATGACATCACAAAGTTGT
TGCTTTTGGAATATTTTATTAACTGTTTTAACCTTGTGATGCAATAGTGGGGTATTGTCA
CAATCATTTTACGATTGTTATGAACAGTGACGTAACAATAGGCAATTATCCGTGGTCCTG
TATATAAATACAATTGTGATCTTATAGTAA
| PANTHER |
TopoI (IPR001631) - T[19-707] 8.3E-291 |
| SUPERFAMILY |
TopoI_DNA-bd_euk_N_sf (IPR036202) - T[157-371] 1.1E-91 |
| Gene3D |
DNA_topo_DNA_db_N_dom2 (IPR013030) - T[159-188] 2.2E-82 - T[261-370] 2.2E-82 |
| Pfam |
TopoI_DNA-bd_euk (IPR008336) - T[172-370] 5.4E-81 |
| Gene3D |
DNA_topo_DNA_db_N_dom1 (IPR013034) - T[189-260] 2.2E-82 |
| SMART |
TopoI_euk (IPR013499) - T[301-679] 4.1E-241 |
| PRINTS |
TopoI (IPR001631) - T[301-310] 3.4E-51 - T[415-434] 3.4E-51 - T[439-453] 3.4E-51 - T[466-482] 3.4E-51 - T[524-538] 3.4E-51 - T[659-670] 3.4E-51 |
| Gene3D |
TopoI_cat_a-hlx-sub_euk (IPR014711) - T[373-527] 3.7E-63 |
| SUPERFAMILY |
DNA_brk_join_enz (IPR011010) - T[373-582] 2.83E-87 - T[654-706] 2.83E-87 |
| Pfam |
TopoI_cat_euk (IPR013500) - T[373-606] 3.4E-97 |
| CDD |
TopoI_cat_euk (IPR013500) - T[379-581] 4.29542E-79 |
| Gene3D |
TopoI_cat_a/b-sub_euk (IPR014727) - T[528-707] 4.0E-70 |
| Pfam |
TopoI_C_dom (IPR025834) - T[638-707] 1.5E-32 |
| ProSitePatterns |
TopoI_AS (IPR018521) - T[652-670] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOP1_HUMAN | 68.897 % | 776 | 0 |
| TOP1M_HUMAN | 60.746 % | 712 | 0 |