- Transcript 'KH2012:KH.C12.638.v1...' >
- Transcript 'KH2012:KH.L13.2.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.L13.2.v2.A.SL1-1
Possible name(s)
CORIN; HSPG2; LRP2
Gene model
Location
KhL13 [38,192 / 46,624]
Amino acid sequence
Length: 549
>KH.L13.2.v2.A.SL1-1
LNKLTTRKMHCTGLPIFILLSLSLQVVLAGTAYDYTDDYNSDYVDDYKLEENDTPSYICP
GEHIYIEISLLCDGFEDCLDGMDENVEICKIYGRTTTESPSPMIHTAPPTTADPLDYFDY
GNCEAGTYQCPSYPGLCLVSETLCDGRADCPGGEDEMNCHERLSTTNSAPTESNDVTTVA
KQPTNTTLESSSAPKVATTPKPTGSTSVLLIVGLLSGTATMETQSTVATLLVHQPTVTKP
NNDSVNASSPDVSSTFSDDITSTVTVAPTVAESTAAEFTDDVTTENVTSPQTTHAVTEPS
TSRVDVATKPDVVISEKCIPEIEYECRSTRGDCVPRALLCDGYIDCSDGSDEIGCECDLN
EFRCVSGRCISATYRCDGYNDCGDYSDELLGCKNLPRFGRIRDVTTSMTSIAVTSKIEST
SNKVPLVETTNNIHTSAENLKPERVDGSTCEVNVCINEGVCKLQKDYGFICLCPLEYTGQ
FCEKLCQPGMECYKRNSASRSTCSSMFRSYCGLYNATVNAACEKAGKRRKSKGKDIQDQC
TVQQILLQS
Nucleotide sequence
Length: 2,210
>KH2012:KH.L13.2.v2.A.SL1-1
ATACCACCGCTTAAGACTAATACAGCTGCTAATTAAACAAACTAACCACAAGAAAAATGC
ATTGTACCGGATTACCAATCTTCATTCTGCTTTCATTATCCCTACAAGTCGTGCTGGCAG
GTACAGCTTACGACTACACCGACGATTACAACAGCGACTACGTTGATGATTATAAGTTAG
AAGAGAACGATACACCGAGTTACATTTGTCCCGGTGAACATATTTACATTGAGATTTCAC
TTTTGTGCGATGGGTTTGAAGACTGCTTAGATGGAATGGATGAAAACGTGGAAATTTGCA
AAATTTACGGACGAACGACAACTGAATCGCCATCACCCATGATCCACACTGCCCCACCAA
CTACTGCCGATCCATTAGATTACTTTGACTATGGGAACTGTGAGGCTGGAACTTACCAGT
GCCCTAGCTACCCAGGACTCTGCCTTGTCAGTGAGACTCTCTGTGACGGAAGAGCCGACT
GTCCTGGCGGGGAAGACGAAATGAACTGCCACGAGCGACTTTCCACCACAAATTCTGCGC
CGACGGAATCAAATGACGTTACTACCGTTGCTAAGCAACCAACAAACACAACGTTGGAAT
CAAGCTCAGCGCCTAAAGTGGCCACGACGCCAAAGCCAACCGGGTCAACGAGTGTATTGC
TGATCGTTGGTTTACTTAGCGGAACAGCGACGATGGAAACTCAATCAACCGTTGCAACTT
TACTTGTTCACCAGCCAACCGTCACTAAACCGAACAACGACAGCGTAAACGCAAGCTCCC
CTGACGTATCGTCGACATTTTCAGATGACATCACCTCAACTGTTACGGTGGCACCAACTG
TCGCCGAGTCAACAGCGGCGGAATTTACTGATGACGTCACCACAGAAAACGTGACGTCAC
CGCAGACCACTCACGCCGTAACCGAACCCTCAACGTCACGCGTCGACGTTGCTACAAAGC
CGGACGTGGTGATTTCAGAGAAATGTATTCCGGAGATTGAATACGAGTGCAGGTCAACCA
GGGGCGACTGCGTGCCACGGGCATTGCTGTGTGATGGTTACATTGATTGTTCGGACGGAT
CTGATGAAATAGGATGCGAATGTGATTTGAACGAGTTTCGTTGCGTCAGCGGGCGCTGCA
TTAGCGCCACCTATCGGTGTGATGGGTACAACGATTGCGGCGATTACAGCGATGAACTAC
TCGGCTGCAAAAATCTTCCTCGGTTCGGACGTATACGTGACGTAACCACTTCTATGACGT
CAATTGCTGTGACGTCAAAAATAGAATCAACCTCTAATAAAGTACCACTGGTTGAGACAA
CTAACAACATCCATACTTCTGCTGAAAATTTAAAGCCAGAAAGAGTTGACGGTTCAACTT
GTGAAGTAAACGTTTGTATCAACGAAGGCGTGTGTAAACTGCAAAAGGATTACGGCTTCA
TCTGCTTGTGTCCACTGGAATATACTGGTCAGTTTTGTGAAAAATTATGCCAACCTGGAA
TGGAGTGTTATAAAAGAAACAGCGCAAGCAGATCCACCTGTTCTTCAATGTTTAGAAGCT
ACTGTGGACTCTATAACGCCACAGTAAATGCCGCCTGCGAGAAAGCAGGAAAACGCAGAA
AGTCCAAGGGAAAGGACATTCAAGATCAATGCACTGTACAGCAAATACTGTTACAAAGTT
AGGGTACTGATCACCCAGCACTTACACTACCTGTTCAACTGCACCATTTTAACGTTCCTA
AAGTCTCTTGGTGCCAATGCCAGTAGGCAAATGTAATTAATTCTCTATGCAATAATGCTG
TGAGCTGTGATGCCTTTTATTTTTATTTTTCTGTTAATTTATTGTGCGTTCTGCTCATTT
TAAGAAATTGCATATTGCAAGGTAACAATTGACGAATGAAACTTTATTGCAAGCACTGGG
TTGAGCCACCTTTTTTTATCGTAACGACCGAACTTCACAACATTTTACCTTACTACCTCC
CACCAATGTACACATTAGGCTTTTTGCCATATCATATTGCTATCACGTAAGATCAAACTC
TTTGGTAAGATTTAAATTCATATAATGAAATTTTGCATCCGAAATTGTTATATAGCGTAT
ATTTTTGATTCGTCCGGTTTCTAAATCAAGTTCCTGACCGATTTTTACTTTTAATTATTA
TTTTAAACCATCCTTGATTTTACATTGTGTGCAATACAATTGAAACCGTA
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[51-91] 0.0071 - T[122-161] 5.0E-7 - T[317-355] 3.8E-7 - T[356-394] 8.8E-15 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[56-85] 3.8E-5 - T[122-162] 8.51E-8 - T[323-355] 1.23E-7 - T[357-389] 5.24E-10 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[63-84] 3.0E-24 - T[135-156] 3.0E-24 - T[331-352] 3.0E-24 - T[367-388] 3.0E-24 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[122-160] 11.637 - T[317-356] 12.812 - T[356-393] 13.413 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[122-159] 4.1E-6 - T[318-355] 1.2E-7 - T[356-392] 6.8E-12 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[123-159] 4.62627E-6 - T[323-355] 1.61575E-7 - T[357-389] 2.37085E-11 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[137-159] . - T[369-392] . |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[446-483] 17.495 |
| SMART |
EGF-like_dom (IPR000742) - T[449-483] 0.0083 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[471-482] . |
| Protein Name | Identity | Bit Score | e-value |
|---|