- Transcript 'KH2012:KH.L13.2.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.L13.2.v3.A.SL1-2
Possible name(s)
CORIN; HSPG2; LRP2
Gene model
Location
KhL13 [42,996 / 46,624]
Amino acid sequence
Length: 482
>KH.L13.2.v3.A.SL1-2
LNKLTTRKMHCTGLPIFILLSLSLQVVLAGTAYDYTDDYNSDYVDDYKLEENDTPSYICP
GEHIYIEISLLCDGFEDCLDGMDENVEICKIYGRTTTESPSPMIHTAPPTTADPLDYFDY
GNCEAGTYQCPSYPGLCLVSETLCDGRADCPGGEDEMNCHGSARPDFHSYSASYDNDIRM
SGPSSSTTNSNNEEEVTRIRTSDSEVRTSTNDIVDPLENNIFYAKKKPVVPLPSHTEYSN
EQTANLNSDVPETGNTETPVFPDLISHNRPTLVVKKKPTIVKIPIKPIQEFSVHSFNAVY
KQRPNDKQAVELGETESIHYAPDPSTLSNEEAEAMMVAMLAGEGGFVPAAETSTIIPATT
ATTSTTETTTTAATTTTTAATTTTATATTATVENVETTSTTKPCKHALRQSSVRKQRKKV
KGLLGQLMRQMTKLAASDLDNSNVNLSIKIGGSDHLSSANDSPNTSERSKEPKIRINLEL
VL
Nucleotide sequence
Length: 2,055
>KH2012:KH.L13.2.v3.A.SL1-2
ATACCACCGCTTAAGACTAATACAGCTGCTAATTAAACAAACTAACCACAAGAAAAATGC
ATTGTACCGGATTACCAATCTTCATTCTGCTTTCATTATCCCTACAAGTCGTGCTGGCAG
GTACAGCTTACGACTACACCGACGATTACAACAGCGACTACGTTGATGATTATAAGTTAG
AAGAGAACGATACACCGAGTTACATTTGTCCCGGTGAACATATTTACATTGAGATTTCAC
TTTTGTGCGATGGGTTTGAAGACTGCTTAGATGGAATGGATGAAAACGTGGAAATTTGCA
AAATTTACGGACGAACGACAACTGAATCGCCATCACCCATGATCCACACTGCCCCACCAA
CTACTGCCGATCCATTAGATTACTTTGACTATGGGAACTGTGAGGCTGGAACTTACCAGT
GCCCTAGCTACCCAGGACTCTGCCTTGTCAGTGAGACTCTCTGTGACGGAAGAGCCGACT
GTCCTGGCGGGGAAGACGAAATGAACTGCCACGGATCTGCTAGACCTGATTTTCATTCTT
ACTCGGCGTCTTATGACAACGATATTAGAATGTCTGGACCCAGTTCTTCCACCACGAATT
CCAACAACGAAGAAGAAGTTACCAGGATTAGAACTTCAGATAGTGAAGTTCGTACAAGCA
CAAATGACATTGTAGACCCATTAGAAAACAACATATTTTATGCAAAAAAGAAGCCAGTGG
TCCCCCTACCGTCTCACACTGAATACAGCAATGAGCAAACCGCGAACTTGAACTCTGATG
TCCCTGAAACTGGAAACACTGAAACCCCAGTGTTCCCCGATTTAATTTCGCACAACCGTC
CTACACTTGTGGTTAAAAAGAAACCGACCATTGTGAAGATTCCTATCAAGCCCATACAAG
AGTTTTCTGTACACTCATTCAACGCTGTGTACAAGCAAAGACCTAACGACAAACAAGCAG
TCGAGTTGGGGGAAACCGAGTCTATACATTATGCTCCAGACCCATCTACGTTGTCAAACG
AAGAGGCCGAAGCAATGATGGTGGCAATGTTAGCTGGGGAAGGGGGTTTTGTACCTGCTG
CTGAAACGTCGACGATTATACCAGCAACAACAGCTACCACATCGACAACAGAAACAACAA
CAACAGCAGCAACTACAACAACTACAGCAGCAACAACTACAACTGCAACTGCAACAACTG
CCACAGTTGAAAACGTGGAAACGACCTCCACCACAAAACCATGCAAACATGCCCTTCGTC
AATCCTCAGTACGAAAACAAAGGAAAAAGGTAAAAGGTTTGCTCGGCCAACTCATGAGAC
AGATGACCAAACTGGCAGCTTCTGATTTGGACAACTCCAATGTTAATTTAAGCATTAAAA
TTGGCGGGTCGGATCATTTGTCTTCCGCGAACGATTCACCTAACACCTCCGAACGATCAA
AGGAACCAAAGATTCGAATAAATCTCGAGTTAGTTCTTTGAACACATTTAAGCAACAGTC
AGCATGACAATGTCGATGACACACGCGAGTAACGAGAAGCGGACGGATAGTTAACTGCTG
CTGGGTCCAGTAAAGGAGTAGAAGCCTGAACTAAATATTAAAACACAATACCTCCAACTA
TTTCTATCTTTATTTCTTTCTATTTTTTAAGTTTTTTCTTGCTCTCCTTATATGTCAACA
TTCTATTCTTGTTTTACTTTTGACAGGCACGCAGTATTTTTTAGTTTTTTTTTACATAAT
TTAAGCTGCATTTTAAATGTCTGTGTTTAAATAGCACATGGTGAAGTGTTTTAATTCTTC
AATACTGTAGTACTGGAAAGCTGGTAAATATCTTAAATGCTGCTTTGACCTTGCCATAAG
GAATACACCTGGTGTGTATGCTAATTAACTTTCAGTAATGTTTCTGAATGAAAAACGTCT
TAGTTTCATGACTGTTTTACTAATGTGCTTGCTCTTATGCAACCTTGGAGCTTTTTCATT
TTAATATATACTCAGTTACGTTTATTGTCATTGTGTTGTTTTTATTCTTTCTTTAATAAA
AAAAATATTTTCTTC
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[51-91] 0.0071 - T[122-161] 1.0E-6 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[56-85] 3.14E-5 - T[121-160] 1.83E-7 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[63-84] 9.8E-7 - T[135-156] 9.8E-7 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[66-85] 0.00135881 - T[123-159] 2.90605E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[122-159] 3.5E-6 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[122-160] 11.637 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[137-159] . |
| Protein Name | Identity | Bit Score | e-value |
|---|