- Transcript 'KH2012:KH.L132.4.v1....'
Transcript Model
Transcript Id
KH2012:KH.L132.4.v1.A.ND1-1
Possible name(s)
FBN1; MATN2; MEGF6
Gene model
Location
KhL132 [107,490 / 110,984]
Amino acid sequence
Length: 474
>KH.L132.4.v1.A.ND1-1
KMNSVAVLRMFLCVSVAAIFVEASTNINSKSFIHKLAKRTTSSIGRNIRPRRSFQPETVR
KSAIPNRATACNTCLLTGRNHRYRFPERRGCFRSVYALVPKCEGYCESYQVPSYHNLIQS
KHSACTAQTTRTLRVFNPYCFGGANRLFYITIPTSCSCTTGTEFQPGYIPGSAWRTVDVD
ECSVNNGGCSHGCTNTIGSFYCSCPEGQTLVADGVTCDINECVDENGGCSHQCVDLSPGY
ECACPAGMLLGPNMQTCEVDSCAALVAPFVCDQNCHNIVGGSYTCSCDDGYILEADGHNC
TDVDECANSENGGGCANPAVCVNLPGTFECVCPDEPDDFVLIDGSICERDECSDPDMGGC
SHNCTNTIGSYMCFCPSGMTLIEDQLTCNVDECQDANGGCQQTCVNTLDGYRCECGQGLE
LNADLHTCDDINECMINNGECSHNCTNLVSGYECSCPENMILNGDGFTCRQGQD
Nucleotide sequence
Length: 1,770
>KH2012:KH.L132.4.v1.A.ND1-1
TTCTCGAGGTAGCAAAGCAACAAGGCTGAGCGCGATTTAACAAAATCTCATCAGCGAAGT
AACAGAGTTTTTCACGAATTGATAACGTTGATGCAAATAGCAAACTTATTCTCGAACAAT
CAAGAAGATCAATCGGCGATTTGCGTGGTGTGTAGCAAAAGTGAAAAATGAACAGCGTCG
CAGTTTTGCGAATGTTCTTGTGTGTTTCAGTCGCAGCTATATTTGTAGAGGCTTCCACAA
ATATTAATTCGAAATCGTTTATTCACAAACTTGCCAAGCGGACCACCAGCTCGATCGGAA
GAAATATCCGACCTCGGCGATCGTTTCAACCAGAAACCGTCAGGAAATCGGCGATACCAA
ACAGAGCCACAGCATGCAACACTTGTTTGTTGACAGGACGAAACCACAGATATCGCTTTC
CAGAAAGAAGGGGTTGCTTTAGATCAGTTTACGCCCTTGTGCCGAAATGCGAGGGGTACT
GCGAGTCATACCAAGTCCCTTCCTACCACAATTTGATCCAAAGTAAACACTCAGCTTGTA
CTGCGCAGACGACGCGAACATTGAGAGTTTTCAATCCCTATTGCTTCGGCGGAGCAAACC
GTTTGTTTTATATAACCATCCCCACATCTTGTAGCTGTACAACCGGAACTGAATTTCAAC
CTGGTTACATTCCCGGTTCGGCCTGGAGAACAGTCGACGTCGATGAATGCAGCGTTAACA
ACGGTGGTTGCAGCCACGGTTGTACCAACACTATCGGATCTTTCTATTGTTCTTGTCCTG
AAGGACAGACTCTAGTTGCCGATGGCGTTACATGCGATATCAATGAATGTGTCGATGAGA
ACGGAGGTTGCAGCCACCAGTGTGTTGATCTTTCACCAGGATATGAATGTGCTTGCCCGG
CGGGTATGCTGCTCGGACCAAACATGCAGACTTGCGAGGTCGACAGTTGCGCAGCTTTGG
TTGCCCCATTCGTATGCGACCAAAACTGCCACAACATTGTCGGTGGTTCATACACTTGTT
CATGCGATGATGGATACATTTTAGAAGCTGATGGTCACAATTGCACAGACGTTGACGAAT
GCGCCAACAGCGAGAACGGCGGTGGATGCGCAAACCCCGCTGTTTGCGTCAACCTTCCAG
GAACCTTCGAATGCGTTTGCCCAGATGAGCCAGATGATTTCGTTCTTATTGATGGATCCA
TTTGCGAACGTGATGAATGCTCCGACCCTGATATGGGCGGTTGCTCGCATAACTGCACCA
ACACCATCGGAAGCTATATGTGTTTCTGCCCATCAGGAATGACACTCATTGAAGATCAAC
TTACATGCAACGTCGATGAATGCCAAGATGCCAACGGTGGATGCCAACAAACATGCGTCA
ACACACTTGATGGTTACAGATGCGAATGCGGACAAGGTTTGGAACTTAACGCTGATCTTC
ACACTTGTGATGACATCAATGAATGTATGATCAACAACGGTGAATGCTCACACAACTGCA
CAAACTTGGTGTCCGGATACGAATGTTCTTGCCCAGAGAACATGATCTTGAACGGCGATG
GCTTCACTTGCCGGCAAGGACAAGACTAACTTGTATCGTGTTACGTTTCATTAACTTTGC
AAACTTCCAAATAAAATTCACTGCCGTATGATGTCGCCATTTCACTATATTCCACCCCAC
ATTTTTCTTTCTTTACAAACAAAATCGGTTTTTAATATACGTCATAAATGAATTGTACCT
CGTTTGGAATAAATAATAGACGGTCATTCT
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[85-160] 4.21E-5 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[178-218] 8.304 - T[258-301] 6.702 - T[302-348] 11.125 - T[389-429] 8.61 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[178-215] 5.7E-7 - T[218-258] 7.1E-8 - T[259-301] 0.0029 - T[302-348] 1.5E-5 - T[350-385] 0.0018 - T[389-429] 4.3E-7 - T[430-470] 9.1E-5 |
| SMART |
EGF-like_dom (IPR000742) - T[181-218] 0.0035 - T[221-258] 2.4E-5 - T[261-301] 0.0051 - T[305-348] 0.024 - T[351-389] 0.001 - T[392-429] 0.0025 - T[433-470] 0.073 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[193-204] . - T[321-332] . - T[404-415] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[219-354] 2.35E-12 - T[346-470] 1.88E-16 |
| Pfam |
cEGF (IPR026823) - T[282-305] 5.3E-9 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[285-300] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[302-330] . - T[430-454] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN1_HUMAN | 35.522 % | 141 | 7.36E-36 |
| MEGF6_HUMAN | 41.414 % | 163 | 3.65E-43 |
| MATN2_HUMAN | 37.037 % | 162 | 3.53E-43 |