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TRANSCRIPT CARD

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  1. Clone 'cima822343'
  2. Transcript 'KH2012:KH.C12.276.v2...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.L133.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.5.v1.A.ND2-1

Possible name(s)

UBAC1; USP13; USP5

Location

KhL133 [14,008 / 15,452]

Sequences

Amino acid sequence

Length: 372

>KH.L133.5.v1.A.ND2-1
ENMTSRCSAYCCVTVSDLYGNDTIVNVTPEMLIEKIKEMAVKQITADTEATGNVGQYRLI
LINNTPRSLCDDKTAKQESLLEGDSTLLLKNRNNKQPMSSLVKDGVVSHEGPSLSSIARA
TEGLPAMSGASTSSETSDMIGAATSSEQVEQTLRKVLLALLELSYKFMHFNDDQKSKQEV
EFEVSDVKHLTDMGFSEARAKRALVLNNMNTNLAMEWLLQHADDSSDDEQMETSGPPSVG
QRFRKFKPNPTHLTSLMDMGFNKEESVQALKINNNNLNSACEWLLGDRKVDDSHDVEDEM
LNPESELYKALVANPTIHIGLHDRKVLEALEDMVENPWRRNSWAYESAVGNVILQILKLY
NKYSTSAPQTNP

Nucleotide sequence

Length: 1,388

>KH2012:KH.L133.5.v1.A.ND2-1
GTTTGTTGCGAATGTTCCGTTTACTTATATTTAAACAACATGTGATGTTATAACTAATAT
TTCAATTCTTTATTTATATTAAGTGTCTGGTTGAGAAAATATGACGTCAAGATGTTCTGC
TTATTGTTGCGTCACAGTGAGTGATTTATACGGGAATGACACCATTGTTAATGTAACTCC
AGAAATGTTGATTGAAAAGATTAAAGAAATGGCTGTGAAACAAATAACGGCCGATACAGA
AGCTACCGGGAACGTTGGCCAATACAGGTTGATTCTCATCAATAATACACCGCGGTCATT
ATGTGATGATAAAACTGCTAAACAAGAATCTTTATTGGAGGGTGATTCAACTTTATTGTT
AAAGAATAGAAATAACAAACAACCAATGAGTTCGTTGGTTAAGGACGGAGTTGTTTCGCA
CGAAGGTCCGAGTTTGAGTTCGATAGCTCGTGCCACCGAGGGGTTGCCAGCAATGAGCGG
GGCGTCGACATCGAGTGAAACATCGGACATGATCGGGGCGGCCACGTCATCTGAACAAGT
TGAACAAACTCTGCGCAAAGTTTTGTTGGCGCTTCTTGAATTGTCGTATAAGTTCATGCA
TTTTAACGATGATCAAAAGTCGAAGCAGGAAGTTGAATTTGAGGTGTCAGATGTGAAACA
CCTCACCGACATGGGGTTTAGTGAAGCGAGGGCAAAGCGAGCGTTGGTGTTGAACAACAT
GAACACCAACCTAGCAATGGAATGGTTGTTGCAACACGCCGATGATTCAAGTGATGACGA
ACAAATGGAAACATCGGGGCCACCTAGTGTTGGACAACGATTCCGAAAGTTCAAACCAAA
CCCGACTCACCTCACGTCACTTATGGACATGGGGTTTAATAAGGAGGAAAGTGTTCAGGC
TTTGAAGATCAACAACAACAACCTGAACAGCGCCTGCGAGTGGTTGCTTGGTGATCGCAA
GGTGGACGACTCGCATGATGTTGAAGATGAAATGTTGAATCCCGAGAGTGAATTGTACAA
AGCGTTGGTGGCGAACCCAACTATACATATAGGGTTGCATGATAGGAAAGTATTGGAAGC
TTTGGAAGACATGGTGGAGAACCCGTGGCGTAGGAACAGCTGGGCGTATGAAAGTGCCGT
CGGGAACGTTATATTGCAAATCCTTAAACTTTACAATAAATATTCAACTTCTGCTCCTCA
AACAAACCCATAATATTAATGTTATGTTTATTGTGGTTGATTTAAAAATGAAAAAAATAA
ATATTGCTATTGTTGCAACAATCGTTGATAAAATATTCGTTAAATAAATAACCAAGTTAT
AAAGTGGTAAAATGAAGGCACCATCATCACGTTATCTCTTCACCCCTCCTTTCAACGCGC
CATACAAA

InterProScan

SUPERFAMILY
UBA-like_sf (IPR009060) - T[176-232] 4.52E-14 - T[227-292] 2.26E-13
ProSiteProfiles
UBA (IPR015940) - T[179-221] 12.547 - T[247-287] 13.776
SMART
UBA (IPR015940) - T[183-220] 7.1E-7 - T[249-286] 2.2E-8
Pfam
UBA (IPR015940) - T[187-218] 1.2E-6 - T[249-284] 2.2E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBAC1_HUMAN 30.612 % 172 4.75E-50