Aniseed - Transcript Card

Transcript 'KH2012:KH.L61.1.v4.R...' >
Transcript 'KH2012:KH.L133.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.5.v1.A.nonSL7-1

Possible name(s)

UBAC1; USP13; USP5

Gene model

KH2012:KH.L133.5

Location

KhL133 [14,155 / 15,452]

Sequences

Amino acid sequence

Length: 354

>KH.L133.5.v1.A.nonSL7-1
YGNDTIVNVTPEMLIEKIKEMAVKQITADTEATGNVGQYRLILINNTPRSLCDDKTAKQE
SLLEGDSTLLLKNRNNKQPMSSLVKDGVVSHEGPSLSSIARATEGLPAMSGASTSSETSD
MIGAATSSEQVEQTLRKVLLALLELSYKFMHFNDDQKSKQEVEFEVSDVKHLTDMGFSEA
RAKRALVLNNMNTNLAMEWLLQHADDSSDDEQMETSGPPSVGQRFRKFKPNPTHLTSLMD
MGFNKEESVQALKINNNNLNSACEWLLGDRKVDDSHDVEDEMLNPESELYKALVANPTIH
IGLHDRKVLEALEDMVENPWRRNSWAYESAVGNVILQILKLYNKYSTSAPQTNP

Nucleotide sequence

Length: 1,241

>KH2012:KH.L133.5.v1.A.nonSL7-1
ATACGGGAATGACACCATTGTTAATGTAACTCCAGAAATGTTGATTGAAAAGATTAAAGA
AATGGCTGTGAAACAAATAACGGCCGATACAGAAGCTACCGGGAACGTTGGCCAATACAG
GTTGATTCTCATCAATAATACACCGCGGTCATTATGTGATGATAAAACTGCTAAACAAGA
ATCTTTATTGGAGGGTGATTCAACTTTATTGTTAAAGAATAGAAATAACAAACAACCAAT
GAGTTCGTTGGTTAAGGACGGAGTTGTTTCGCACGAAGGTCCGAGTTTGAGTTCGATAGC
TCGTGCCACCGAGGGGTTGCCAGCAATGAGCGGGGCGTCGACATCGAGTGAAACATCGGA
CATGATCGGGGCGGCCACGTCATCTGAACAAGTTGAACAAACTCTGCGCAAAGTTTTGTT
GGCGCTTCTTGAATTGTCGTATAAGTTCATGCATTTTAACGATGATCAAAAGTCGAAGCA
GGAAGTTGAATTTGAGGTGTCAGATGTGAAACACCTCACCGACATGGGGTTTAGTGAAGC
GAGGGCAAAGCGAGCGTTGGTGTTGAACAACATGAACACCAACCTAGCAATGGAATGGTT
GTTGCAACACGCCGATGATTCAAGTGATGACGAACAAATGGAAACATCGGGGCCACCTAG
TGTTGGACAACGATTCCGAAAGTTCAAACCAAACCCGACTCACCTCACGTCACTTATGGA
CATGGGGTTTAATAAGGAGGAAAGTGTTCAGGCTTTGAAGATCAACAACAACAACCTGAA
CAGCGCCTGCGAGTGGTTGCTTGGTGATCGCAAGGTGGACGACTCGCATGATGTTGAAGA
TGAAATGTTGAATCCCGAGAGTGAATTGTACAAAGCGTTGGTGGCGAACCCAACTATACA
TATAGGGTTGCATGATAGGAAAGTATTGGAAGCTTTGGAAGACATGGTGGAGAACCCGTG
GCGTAGGAACAGCTGGGCGTATGAAAGTGCCGTCGGGAACGTTATATTGCAAATCCTTAA
ACTTTACAATAAATATTCAACTTCTGCTCCTCAAACAAACCCATAATATTAATGTTATGT
TTATTGTGGTTGATTTAAAAATGAAAAAAATAAATATTGCTATTGTTGCAACAATCGTTG
ATAAAATATTCGTTAAATAAATAACCAAGTTATAAAGTGGTAAAATGAAGGCACCATCAT
CACGTTATCTCTTCACCCCTCCTTTCAACGCGCCATACAAA

InterProScan

SUPERFAMILY	UBA-like_sf (IPR009060) - T[158-214] 4.13E-14 - T[209-274] 2.07E-13
ProSiteProfiles	UBA (IPR015940) - T[161-203] 12.547 - T[229-269] 13.776
SMART	UBA (IPR015940) - T[165-202] 7.1E-7 - T[231-268] 2.2E-8
Pfam	UBA (IPR015940) - T[169-200] 1.1E-6 - T[231-266] 2.0E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UBAC1_HUMAN	30.612 %	172	2.72E-50