Aniseed - Transcript Card

Transcript 'Boleac.CG.SB_v3.S103...' >
Transcript 'KH2012:KH.L133.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.5.v1.A.SL3-1

Possible name(s)

UBAC1; USP13; USP5

Gene model

KH2012:KH.L133.5

Location

KhL133 [14,091 / 15,452]

Sequences

Amino acid sequence

Length: 372

>KH.L133.5.v1.A.SL3-1
ENMTSRCSAYCCVTVSDLYGNDTIVNVTPEMLIEKIKEMAVKQITADTEATGNVGQYRLI
LINNTPRSLCDDKTAKQESLLEGDSTLLLKNRNNKQPMSSLVKDGVVSHEGPSLSSIARA
TEGLPAMSGASTSSETSDMIGAATSSEQVEQTLRKVLLALLELSYKFMHFNDDQKSKQEV
EFEVSDVKHLTDMGFSEARAKRALVLNNMNTNLAMEWLLQHADDSSDDEQMETSGPPSVG
QRFRKFKPNPTHLTSLMDMGFNKEESVQALKINNNNLNSACEWLLGDRKVDDSHDVEDEM
LNPESELYKALVANPTIHIGLHDRKVLEALEDMVENPWRRNSWAYESAVGNVILQILKLY
NKYSTSAPQTNP

Nucleotide sequence

Length: 1,305

>KH2012:KH.L133.5.v1.A.SL3-1
TGTCTGGTTGAGAAAATATGACGTCAAGATGTTCTGCTTATTGTTGCGTCACAGTGAGTG
ATTTATACGGGAATGACACCATTGTTAATGTAACTCCAGAAATGTTGATTGAAAAGATTA
AAGAAATGGCTGTGAAACAAATAACGGCCGATACAGAAGCTACCGGGAACGTTGGCCAAT
ACAGGTTGATTCTCATCAATAATACACCGCGGTCATTATGTGATGATAAAACTGCTAAAC
AAGAATCTTTATTGGAGGGTGATTCAACTTTATTGTTAAAGAATAGAAATAACAAACAAC
CAATGAGTTCGTTGGTTAAGGACGGAGTTGTTTCGCACGAAGGTCCGAGTTTGAGTTCGA
TAGCTCGTGCCACCGAGGGGTTGCCAGCAATGAGCGGGGCGTCGACATCGAGTGAAACAT
CGGACATGATCGGGGCGGCCACGTCATCTGAACAAGTTGAACAAACTCTGCGCAAAGTTT
TGTTGGCGCTTCTTGAATTGTCGTATAAGTTCATGCATTTTAACGATGATCAAAAGTCGA
AGCAGGAAGTTGAATTTGAGGTGTCAGATGTGAAACACCTCACCGACATGGGGTTTAGTG
AAGCGAGGGCAAAGCGAGCGTTGGTGTTGAACAACATGAACACCAACCTAGCAATGGAAT
GGTTGTTGCAACACGCCGATGATTCAAGTGATGACGAACAAATGGAAACATCGGGGCCAC
CTAGTGTTGGACAACGATTCCGAAAGTTCAAACCAAACCCGACTCACCTCACGTCACTTA
TGGACATGGGGTTTAATAAGGAGGAAAGTGTTCAGGCTTTGAAGATCAACAACAACAACC
TGAACAGCGCCTGCGAGTGGTTGCTTGGTGATCGCAAGGTGGACGACTCGCATGATGTTG
AAGATGAAATGTTGAATCCCGAGAGTGAATTGTACAAAGCGTTGGTGGCGAACCCAACTA
TACATATAGGGTTGCATGATAGGAAAGTATTGGAAGCTTTGGAAGACATGGTGGAGAACC
CGTGGCGTAGGAACAGCTGGGCGTATGAAAGTGCCGTCGGGAACGTTATATTGCAAATCC
TTAAACTTTACAATAAATATTCAACTTCTGCTCCTCAAACAAACCCATAATATTAATGTT
ATGTTTATTGTGGTTGATTTAAAAATGAAAAAAATAAATATTGCTATTGTTGCAACAATC
GTTGATAAAATATTCGTTAAATAAATAACCAAGTTATAAAGTGGTAAAATGAAGGCACCA
TCATCACGTTATCTCTTCACCCCTCCTTTCAACGCGCCATACAAA

InterProScan

SUPERFAMILY	UBA-like_sf (IPR009060) - T[176-232] 4.52E-14 - T[227-292] 2.26E-13
ProSiteProfiles	UBA (IPR015940) - T[179-221] 12.547 - T[247-287] 13.776
SMART	UBA (IPR015940) - T[183-220] 7.1E-7 - T[249-286] 2.2E-8
Pfam	UBA (IPR015940) - T[187-218] 1.2E-6 - T[249-284] 2.2E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UBAC1_HUMAN	30.612 %	172	4.75E-50