Aniseed - Transcript Card

Transcript 'KH2012:KH.L133.9.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.9.v1.A.nonSL14-1

Possible name(s)

RPS8

Gene model

KH2012:KH.L133.9

Location

KhL133 [131 / 1,924]

Sequences

Amino acid sequence

Length: 217

>KH.L133.9.v1.A.nonSL14-1
FFTRSEDQRMGISQDSWHKRRATGGKRPQPRKKRKFELGRPAANTKIGAKRVHLVRTRGG
NTKFRGLRLDTGNFSWGSEACARKTRIIDVMYNASNNELLRTKTLVKNAIIQIDSTPFRQ
WYEAHYTVPLGRKKSAKLTEAEDEIMNRKRSKKTQKKYEERKKEPKVAQALEEQFNQGRI
LACISSRPGQSGRCDGYILEGKELEFYQRKIKARKGK

Nucleotide sequence

Length: 1,464

>KH2012:KH.L133.9.v1.A.nonSL14-1
CACCCACAATGCATCGCGTAGAATGGACGATCTTTTTAGTTTTTCACCCGAAGTGAAGAT
CAGAGGATGGGGATTTCTCAAGATTCGTGGCATAAGAGGCGGGCTACTGGCGGTAAAAGG
CCGCAACCGCGTAAGAAGCGAAAGTTCGAACTTGGTCGGCCAGCAGCGAACACGAAGATT
GGTGCAAAGAGAGTCCATCTGGTTCGCACACGTGGTGGCAACACCAAGTTTCGCGGCCTC
AGGTTGGACACCGGTAACTTTTCCTGGGGTTCTGAAGCATGCGCGAGAAAAACCCGAATC
ATCGACGTAATGTACAACGCAAGCAACAACGAACTTCTCCGAACCAAAACCTTGGTAAAG
AACGCCATCATCCAAATTGATAGCACACCCTTTCGCCAATGGTATGAGGCTCACTACACC
GTACCCCTCGGGCGCAAGAAGTCCGCCAAGTTAACGGAAGCCGAGGATGAAATTATGAAC
CGCAAGCGTTCCAAGAAGACGCAGAAGAAATACGAGGAACGCAAGAAAGAACCGAAGGTT
GCCCAAGCATTGGAGGAACAATTCAACCAGGGTCGGATACTTGCGTGCATTTCATCACGA
CCCGGCCAAAGTGGTCGATGCGATGGTTATATCTTGGAGGGAAAGGAACTCGAGTTCTAC
CAACGCAAGATTAAAGCGAGAAAGGGAAAGTAAACGTCTCGCTAATCATGTTCAAATAAA
AATATAAAGAAAACAGAAGTTGTGTTTTTAATATAACATGCTTGATGTAGCTTTGTATGT
AACAAAAGAACAAAGTGATAAAACATTAAAATAAGTAGTAGTTTCACAACATTTAGTTTA
GTTATCATTGGAAGAATATATTTCATAGTGATAGGACATAAATAAATTGAAAGAGTTTTA
TGCAATTATAATTTTCAAATACATTAAAATAAAGAACAACTTTAAATAATAATACTGCTG
AGTTAAATATTCAACGTTTAAAAGCCCCATGCTTGGACGCTTCCAACACCAACTCGTACA
AAACTTCTTTGTCCAATAATTTAAAGCTTTCGGTTTGTACGACTTTGGTCATGTGGTTTA
AACAGAACTGGAAGCAAAAATCTTGAAGTTCCTGCAAACGTAACGTTTAATATTAAGTTG
TTGCAACCGATGGAATCACCTTCGCATTATACTTGATGGCTGCAGCGTACAACAGAGCCG
CATTTTCAACAACAATGCTTTCTTTGATCAATTTCTGACATTGATGTTTCAATCCATTCT
CACAATATGATGTTGCAAGGTCCAACAAACCTGTGACATAGAGGTTACGGGTTCAATGCT
TGTCACTGCTACCACCATTGTTGACGTATATGTGTCTATGTAAGAATTGCTCCAACCAAG
TGGTCACTAATGAGTTGTTTAAATTATGGTAAAAAAAGTACTGTTGTTGCCCCGTCATGC
GAGAATAAATAAGTTGAAACAGAA

InterProScan

Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[10-199] 1.2E-60
TIGRFAM	Ribosomal_S8e (IPR001047) - T[10-201] 4.2E-49
PANTHER	Ribosomal_S8e (IPR001047) - T[10-215] 1.8E-108
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[20-39] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	75.962 %	320	8.84E-113