Aniseed - Transcript Card

Transcript 'KH2012:KH.L133.9.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.9.v1.A.nonSL17-1

Possible name(s)

RPS8

Gene model

KH2012:KH.L133.9

Location

KhL133 [186 / 1,924]

Sequences

Amino acid sequence

Length: 211

>KH.L133.9.v1.A.nonSL17-1
DQRMGISQDSWHKRRATGGKRPQPRKKRKFELGRPAANTKIGAKRVHLVRTRGGNTKFRG
LRLDTGNFSWGSEACARKTRIIDVMYNASNNELLRTKTLVKNAIIQIDSTPFRQWYEAHY
TVPLGRKKSAKLTEAEDEIMNRKRSKKTQKKYEERKKEPKVAQALEEQFNQGRILACISS
RPGQSGRCDGYILEGKELEFYQRKIKARKGK

Nucleotide sequence

Length: 1,409

>KH2012:KH.L133.9.v1.A.nonSL17-1
AAGATCAGAGGATGGGGATTTCTCAAGATTCGTGGCATAAGAGGCGGGCTACTGGCGGTA
AAAGGCCGCAACCGCGTAAGAAGCGAAAGTTCGAACTTGGTCGGCCAGCAGCGAACACGA
AGATTGGTGCAAAGAGAGTCCATCTGGTTCGCACACGTGGTGGCAACACCAAGTTTCGCG
GCCTCAGGTTGGACACCGGTAACTTTTCCTGGGGTTCTGAAGCATGCGCGAGAAAAACCC
GAATCATCGACGTAATGTACAACGCAAGCAACAACGAACTTCTCCGAACCAAAACCTTGG
TAAAGAACGCCATCATCCAAATTGATAGCACACCCTTTCGCCAATGGTATGAGGCTCACT
ACACCGTACCCCTCGGGCGCAAGAAGTCCGCCAAGTTAACGGAAGCCGAGGATGAAATTA
TGAACCGCAAGCGTTCCAAGAAGACGCAGAAGAAATACGAGGAACGCAAGAAAGAACCGA
AGGTTGCCCAAGCATTGGAGGAACAATTCAACCAGGGTCGGATACTTGCGTGCATTTCAT
CACGACCCGGCCAAAGTGGTCGATGCGATGGTTATATCTTGGAGGGAAAGGAACTCGAGT
TCTACCAACGCAAGATTAAAGCGAGAAAGGGAAAGTAAACGTCTCGCTAATCATGTTCAA
ATAAAAATATAAAGAAAACAGAAGTTGTGTTTTTAATATAACATGCTTGATGTAGCTTTG
TATGTAACAAAAGAACAAAGTGATAAAACATTAAAATAAGTAGTAGTTTCACAACATTTA
GTTTAGTTATCATTGGAAGAATATATTTCATAGTGATAGGACATAAATAAATTGAAAGAG
TTTTATGCAATTATAATTTTCAAATACATTAAAATAAAGAACAACTTTAAATAATAATAC
TGCTGAGTTAAATATTCAACGTTTAAAAGCCCCATGCTTGGACGCTTCCAACACCAACTC
GTACAAAACTTCTTTGTCCAATAATTTAAAGCTTTCGGTTTGTACGACTTTGGTCATGTG
GTTTAAACAGAACTGGAAGCAAAAATCTTGAAGTTCCTGCAAACGTAACGTTTAATATTA
AGTTGTTGCAACCGATGGAATCACCTTCGCATTATACTTGATGGCTGCAGCGTACAACAG
AGCCGCATTTTCAACAACAATGCTTTCTTTGATCAATTTCTGACATTGATGTTTCAATCC
ATTCTCACAATATGATGTTGCAAGGTCCAACAAACCTGTGACATAGAGGTTACGGGTTCA
ATGCTTGTCACTGCTACCACCATTGTTGACGTATATGTGTCTATGTAAGAATTGCTCCAA
CCAAGTGGTCACTAATGAGTTGTTTAAATTATGGTAAAAAAAGTACTGTTGTTGCCCCGT
CATGCGAGAATAAATAAGTTGAAACAGAA

InterProScan

TIGRFAM	Ribosomal_S8e (IPR001047) - T[4-195] 3.8E-49
Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[4-193] 1.1E-60
PANTHER	Ribosomal_S8e (IPR001047) - T[4-209] 1.6E-108
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[14-33] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	75.962 %	320	9.48E-113