Aniseed - Transcript Card

Transcript 'KH2012:KH.L133.9.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.9.v1.A.nonSL18-1

Possible name(s)

RPS8

Gene model

KH2012:KH.L133.9

Location

KhL133 [169 / 1,924]

Sequences

Amino acid sequence

Length: 217

>KH.L133.9.v1.A.nonSL18-1
FFTRSEDQRMGISQDSWHKRRATGGKRPQPRKKRKFELGRPAANTKIGAKRVHLVRTRGG
NTKFRGLRLDTGNFSWGSEACARKTRIIDVMYNASNNELLRTKTLVKNAIIQIDSTPFRQ
WYEAHYTVPLGRKKSAKLTEAEDEIMNRKRSKKTQKKYEERKKEPKVAQALEEQFNQGRI
LACISSRPGQSGRCDGYILEGKELEFYQRKIKARKGK

Nucleotide sequence

Length: 1,426

>KH2012:KH.L133.9.v1.A.nonSL18-1
GTTTTTCACCCGAAGTGAAGATCAGAGGATGGGGATTTCTCAAGATTCGTGGCATAAGAG
GCGGGCTACTGGCGGTAAAAGGCCGCAACCGCGTAAGAAGCGAAAGTTCGAACTTGGTCG
GCCAGCAGCGAACACGAAGATTGGTGCAAAGAGAGTCCATCTGGTTCGCACACGTGGTGG
CAACACCAAGTTTCGCGGCCTCAGGTTGGACACCGGTAACTTTTCCTGGGGTTCTGAAGC
ATGCGCGAGAAAAACCCGAATCATCGACGTAATGTACAACGCAAGCAACAACGAACTTCT
CCGAACCAAAACCTTGGTAAAGAACGCCATCATCCAAATTGATAGCACACCCTTTCGCCA
ATGGTATGAGGCTCACTACACCGTACCCCTCGGGCGCAAGAAGTCCGCCAAGTTAACGGA
AGCCGAGGATGAAATTATGAACCGCAAGCGTTCCAAGAAGACGCAGAAGAAATACGAGGA
ACGCAAGAAAGAACCGAAGGTTGCCCAAGCATTGGAGGAACAATTCAACCAGGGTCGGAT
ACTTGCGTGCATTTCATCACGACCCGGCCAAAGTGGTCGATGCGATGGTTATATCTTGGA
GGGAAAGGAACTCGAGTTCTACCAACGCAAGATTAAAGCGAGAAAGGGAAAGTAAACGTC
TCGCTAATCATGTTCAAATAAAAATATAAAGAAAACAGAAGTTGTGTTTTTAATATAACA
TGCTTGATGTAGCTTTGTATGTAACAAAAGAACAAAGTGATAAAACATTAAAATAAGTAG
TAGTTTCACAACATTTAGTTTAGTTATCATTGGAAGAATATATTTCATAGTGATAGGACA
TAAATAAATTGAAAGAGTTTTATGCAATTATAATTTTCAAATACATTAAAATAAAGAACA
ACTTTAAATAATAATACTGCTGAGTTAAATATTCAACGTTTAAAAGCCCCATGCTTGGAC
GCTTCCAACACCAACTCGTACAAAACTTCTTTGTCCAATAATTTAAAGCTTTCGGTTTGT
ACGACTTTGGTCATGTGGTTTAAACAGAACTGGAAGCAAAAATCTTGAAGTTCCTGCAAA
CGTAACGTTTAATATTAAGTTGTTGCAACCGATGGAATCACCTTCGCATTATACTTGATG
GCTGCAGCGTACAACAGAGCCGCATTTTCAACAACAATGCTTTCTTTGATCAATTTCTGA
CATTGATGTTTCAATCCATTCTCACAATATGATGTTGCAAGGTCCAACAAACCTGTGACA
TAGAGGTTACGGGTTCAATGCTTGTCACTGCTACCACCATTGTTGACGTATATGTGTCTA
TGTAAGAATTGCTCCAACCAAGTGGTCACTAATGAGTTGTTTAAATTATGGTAAAAAAAG
TACTGTTGTTGCCCCGTCATGCGAGAATAAATAAGTTGAAACAGAA

InterProScan

Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[10-199] 1.2E-60
TIGRFAM	Ribosomal_S8e (IPR001047) - T[10-201] 4.2E-49
PANTHER	Ribosomal_S8e (IPR001047) - T[10-215] 1.8E-108
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[20-39] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	75.962 %	320	8.84E-113