Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L133.9.v1.A.nonSL8-1

Possible name(s)

RPS8

Gene model

KH2012:KH.L133.9

Location

KhL133 [171 / 1,924]

Sequences

Amino acid sequence

Length: 216

>KH.L133.9.v1.A.nonSL8-1
FTRSEDQRMGISQDSWHKRRATGGKRPQPRKKRKFELGRPAANTKIGAKRVHLVRTRGGN
TKFRGLRLDTGNFSWGSEACARKTRIIDVMYNASNNELLRTKTLVKNAIIQIDSTPFRQW
YEAHYTVPLGRKKSAKLTEAEDEIMNRKRSKKTQKKYEERKKEPKVAQALEEQFNQGRIL
ACISSRPGQSGRCDGYILEGKELEFYQRKIKARKGK

Nucleotide sequence

Length: 1,424

>KH2012:KH.L133.9.v1.A.nonSL8-1
TTTTCACCCGAAGTGAAGATCAGAGGATGGGGATTTCTCAAGATTCGTGGCATAAGAGGC
GGGCTACTGGCGGTAAAAGGCCGCAACCGCGTAAGAAGCGAAAGTTCGAACTTGGTCGGC
CAGCAGCGAACACGAAGATTGGTGCAAAGAGAGTCCATCTGGTTCGCACACGTGGTGGCA
ACACCAAGTTTCGCGGCCTCAGGTTGGACACCGGTAACTTTTCCTGGGGTTCTGAAGCAT
GCGCGAGAAAAACCCGAATCATCGACGTAATGTACAACGCAAGCAACAACGAACTTCTCC
GAACCAAAACCTTGGTAAAGAACGCCATCATCCAAATTGATAGCACACCCTTTCGCCAAT
GGTATGAGGCTCACTACACCGTACCCCTCGGGCGCAAGAAGTCCGCCAAGTTAACGGAAG
CCGAGGATGAAATTATGAACCGCAAGCGTTCCAAGAAGACGCAGAAGAAATACGAGGAAC
GCAAGAAAGAACCGAAGGTTGCCCAAGCATTGGAGGAACAATTCAACCAGGGTCGGATAC
TTGCGTGCATTTCATCACGACCCGGCCAAAGTGGTCGATGCGATGGTTATATCTTGGAGG
GAAAGGAACTCGAGTTCTACCAACGCAAGATTAAAGCGAGAAAGGGAAAGTAAACGTCTC
GCTAATCATGTTCAAATAAAAATATAAAGAAAACAGAAGTTGTGTTTTTAATATAACATG
CTTGATGTAGCTTTGTATGTAACAAAAGAACAAAGTGATAAAACATTAAAATAAGTAGTA
GTTTCACAACATTTAGTTTAGTTATCATTGGAAGAATATATTTCATAGTGATAGGACATA
AATAAATTGAAAGAGTTTTATGCAATTATAATTTTCAAATACATTAAAATAAAGAACAAC
TTTAAATAATAATACTGCTGAGTTAAATATTCAACGTTTAAAAGCCCCATGCTTGGACGC
TTCCAACACCAACTCGTACAAAACTTCTTTGTCCAATAATTTAAAGCTTTCGGTTTGTAC
GACTTTGGTCATGTGGTTTAAACAGAACTGGAAGCAAAAATCTTGAAGTTCCTGCAAACG
TAACGTTTAATATTAAGTTGTTGCAACCGATGGAATCACCTTCGCATTATACTTGATGGC
TGCAGCGTACAACAGAGCCGCATTTTCAACAACAATGCTTTCTTTGATCAATTTCTGACA
TTGATGTTTCAATCCATTCTCACAATATGATGTTGCAAGGTCCAACAAACCTGTGACATA
GAGGTTACGGGTTCAATGCTTGTCACTGCTACCACCATTGTTGACGTATATGTGTCTATG
TAAGAATTGCTCCAACCAAGTGGTCACTAATGAGTTGTTTAAATTATGGTAAAAAAAGTA
CTGTTGTTGCCCCGTCATGCGAGAATAAATAAGTTGAAACAGAA

InterProScan

Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[9-198] 1.2E-60
PANTHER	Ribosomal_S8e (IPR001047) - T[9-214] 1.7E-108
TIGRFAM	Ribosomal_S8e (IPR001047) - T[9-200] 4.1E-49
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[19-38] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	75.962 %	320	7.21E-113