Aniseed - Transcript Card

Transcript 'KH2012:KH.L133.9.v1....'

Transcript Model

Transcript Id

KH2012:KH.L133.9.v1.A.nonSL9-1

Possible name(s)

RPS8

Gene model

KH2012:KH.L133.9

Location

KhL133 [185 / 1,924]

Sequences

Amino acid sequence

Length: 212

>KH.L133.9.v1.A.nonSL9-1
EDQRMGISQDSWHKRRATGGKRPQPRKKRKFELGRPAANTKIGAKRVHLVRTRGGNTKFR
GLRLDTGNFSWGSEACARKTRIIDVMYNASNNELLRTKTLVKNAIIQIDSTPFRQWYEAH
YTVPLGRKKSAKLTEAEDEIMNRKRSKKTQKKYEERKKEPKVAQALEEQFNQGRILACIS
SRPGQSGRCDGYILEGKELEFYQRKIKARKGK

Nucleotide sequence

Length: 1,410

>KH2012:KH.L133.9.v1.A.nonSL9-1
GAAGATCAGAGGATGGGGATTTCTCAAGATTCGTGGCATAAGAGGCGGGCTACTGGCGGT
AAAAGGCCGCAACCGCGTAAGAAGCGAAAGTTCGAACTTGGTCGGCCAGCAGCGAACACG
AAGATTGGTGCAAAGAGAGTCCATCTGGTTCGCACACGTGGTGGCAACACCAAGTTTCGC
GGCCTCAGGTTGGACACCGGTAACTTTTCCTGGGGTTCTGAAGCATGCGCGAGAAAAACC
CGAATCATCGACGTAATGTACAACGCAAGCAACAACGAACTTCTCCGAACCAAAACCTTG
GTAAAGAACGCCATCATCCAAATTGATAGCACACCCTTTCGCCAATGGTATGAGGCTCAC
TACACCGTACCCCTCGGGCGCAAGAAGTCCGCCAAGTTAACGGAAGCCGAGGATGAAATT
ATGAACCGCAAGCGTTCCAAGAAGACGCAGAAGAAATACGAGGAACGCAAGAAAGAACCG
AAGGTTGCCCAAGCATTGGAGGAACAATTCAACCAGGGTCGGATACTTGCGTGCATTTCA
TCACGACCCGGCCAAAGTGGTCGATGCGATGGTTATATCTTGGAGGGAAAGGAACTCGAG
TTCTACCAACGCAAGATTAAAGCGAGAAAGGGAAAGTAAACGTCTCGCTAATCATGTTCA
AATAAAAATATAAAGAAAACAGAAGTTGTGTTTTTAATATAACATGCTTGATGTAGCTTT
GTATGTAACAAAAGAACAAAGTGATAAAACATTAAAATAAGTAGTAGTTTCACAACATTT
AGTTTAGTTATCATTGGAAGAATATATTTCATAGTGATAGGACATAAATAAATTGAAAGA
GTTTTATGCAATTATAATTTTCAAATACATTAAAATAAAGAACAACTTTAAATAATAATA
CTGCTGAGTTAAATATTCAACGTTTAAAAGCCCCATGCTTGGACGCTTCCAACACCAACT
CGTACAAAACTTCTTTGTCCAATAATTTAAAGCTTTCGGTTTGTACGACTTTGGTCATGT
GGTTTAAACAGAACTGGAAGCAAAAATCTTGAAGTTCCTGCAAACGTAACGTTTAATATT
AAGTTGTTGCAACCGATGGAATCACCTTCGCATTATACTTGATGGCTGCAGCGTACAACA
GAGCCGCATTTTCAACAACAATGCTTTCTTTGATCAATTTCTGACATTGATGTTTCAATC
CATTCTCACAATATGATGTTGCAAGGTCCAACAAACCTGTGACATAGAGGTTACGGGTTC
AATGCTTGTCACTGCTACCACCATTGTTGACGTATATGTGTCTATGTAAGAATTGCTCCA
ACCAAGTGGTCACTAATGAGTTGTTTAAATTATGGTAAAAAAAGTACTGTTGTTGCCCCG
TCATGCGAGAATAAATAAGTTGAAACAGAA

InterProScan

PANTHER	Ribosomal_S8e (IPR001047) - T[5-210] 1.6E-108
TIGRFAM	Ribosomal_S8e (IPR001047) - T[5-196] 3.9E-49
Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[5-194] 1.1E-60
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[15-34] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	75.962 %	320	1.06E-112