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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R167...' > 
  2. Transcript 'KH2012:KH.C3.87.v2.C...' > 
  3. Clone 'cima877779' > 
  4. Transcript 'Boleac.CG.SB_v3.S31....' > 
  5. Transcript 'KH2012:KH.L134.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L134.2.v1.A.nonSL2-1

Possible name(s)

PAF1

Gene model

KH2012:KH.L134.2

Location

KhL134 [202,555 / 208,702]

Sequences

Amino acid sequence

Length: 175

>KH.L134.2.v1.A.nonSL2-1
VIRYVYNTLMAPTVQNSSSSSKGRTRGSIERGSGLVTRVKYCNTLPDIPFDPKFIRYPFD
ANRFVDYKPTSLEKQHKTELHTDHDLGVVIDLINPDTYKVNPNTWIHPADEALLEDDLPA
PQDTKRSKQHSLNVSWLRRSEYISQEFNRYGVKSTNVETRIGAGAKEIFQTGRSL

Nucleotide sequence

Length: 1,710

>KH2012:KH.L134.2.v1.A.nonSL2-1
GTGATTCGTTACGTTTATAATACACTTATGGCACCAACTGTACAAAATTCCAGTAGCAGC
AGTAAAGGAAGAACACGAGGTTCAATAGAAAGAGGAAGTGGATTGGTAACGAGAGTCAAA
TATTGCAACACACTTCCAGATATTCCGTTTGATCCAAAGTTTATAAGATATCCGTTCGAT
GCCAACAGATTTGTCGATTACAAGCCTACATCACTTGAGAAACAACATAAGACCGAGCTT
CATACCGACCATGACTTGGGTGTCGTCATTGACCTCATTAACCCTGATACTTATAAAGTG
AACCCCAACACATGGATTCACCCGGCAGATGAAGCTTTACTTGAAGATGATTTACCCGCC
CCACAAGACACTAAACGGTCAAAGCAACACAGTTTAAATGTATCTTGGTTAAGAAGAAGT
GAATATATCTCACAGGAATTCAACAGATATGGAGTGAAATCAACCAATGTGGAAACCAGG
ATTGGAGCCGGTGCCAAAGAAATATTTCAAACAGGACGATCTTTATAAAGACAGAGACGG
ACAAATTGCTGCCATTCAAAAAACTTTCGAAGACTCGAAAAAAGAAATCACTAAACATTA
CAGCAAACCTAACGTGTTCCCTGTGGATGTGTTGCCTATATATCCAGATATGAAGATGTG
GCAACATCCAAGCGCGCAAGTTATCTTTGACACCGACCCTTCAGTGCAAGGCAAACCAGC
TGCTGAACAACTTGAAGAAATGTCACAAGCCATGATTAGAGGAATGGTTGATGAGGAAGG
CGATCAATTCGTTGCTTACTTCCTCCCAACACCGTCTACTCGTCAGAAGAGGAAACGAGA
TGTTGAAGAAGGAGTCGATTTTGAACCAGAGGAAACTTATGATTACAGCTGAAGAGACGG
GCAACCCTGATGAATCGGAAGATGCTTCCAGCTCCGATGAGGATCAAGCAGAGGACAATA
AAGAAGAAGAAGAAATATTTGGAAGTGGGTCCTCCGATGAGGGGGATGAGGAACAATGAT
CATTATGATGTCATACTTGGATGTTTCGTCTCATACATCAGCAGTGGTGTATCTGTGTTG
GATTGGAAAACTTGTTTCTTTGCTTGGAGGATATTTTTGATGTAAAATATTCGGTTTTGC
GCTAAATTTATTACAGTAGTAGTAATAACATGTGCGTAGATTTTTTCTTCCAAACTTTTT
TGGGAAAACCATTCTCGCAGGGCATTTTTTACATTGGTTATCAATGTTGACCCGATATTT
TTGTGTTTTGCTGCTACAAAAAAGTGGTAACGTTTGATTTTTTTGCCAAGGATATTTTTC
ATGTGAAATATTTGGTTTTGCACTAAGTAGTACTAATAAGATGTATGCGAATTTTTTAAC
AAAATTTGCGGGGATTTTAAGGCAAACTGGTAAATCTTACGAGCAGGGCATTTTTCAATC
TATTTTCTACATTTTGCTGCTAATGAAACAACTGATATCAAAGCTTAAGTGCAGAATCAT
ATATATTACTTTTGTTTAAAAGCAAGAGTGGCATATCACCTTTATCGTTGCCCTCATGTA
TATATCCTTATATACCAGGTGTGGTTACGTCACCTTTGATTTATTCACCTTGGTTTTGCA
CTTGTGTATAGTAAGGAATATTTCTGAAATAAAACACAATCAAGGGTTTGATATTTAATA
AAATCTGCAAGATTGGTTTGTAAGAAGTAA

InterProScan

PANTHER
RNA_pol_II-assoc_Paf1 (IPR007133) - T[10-167] 4.1E-57
Pfam
RNA_pol_II-assoc_Paf1 (IPR007133) - T[35-171] 6.7E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAF1_HUMAN 57.055 % 201 1.64E-62