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TRANSCRIPT CARD

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  1. Clone 'cima869829' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.L134.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L134.2.v1.A.nonSL3-1

Possible name(s)

PAF1

Gene model

KH2012:KH.L134.2

Location

KhL134 [202,555 / 208,692]

Sequences

Amino acid sequence

Length: 171

>KH.L134.2.v1.A.nonSL3-1
VYNTLMAPTVQNSSSSSKGRTRGSIERGSGLVTRVKYCNTLPDIPFDPKFIRYPFDANRF
VDYKPTSLEKQHKTELHTDHDLGVVIDLINPDTYKVNPNTWIHPADEALLEDDLPAPQDT
KRSKQHSLNVSWLRRSEYISQEFNRYGVKSTNVETRIGAGAKEIFQTGRSL

Nucleotide sequence

Length: 1,700

>KH2012:KH.L134.2.v1.A.nonSL3-1
ACGTTTATAATACACTTATGGCACCAACTGTACAAAATTCCAGTAGCAGCAGTAAAGGAA
GAACACGAGGTTCAATAGAAAGAGGAAGTGGATTGGTAACGAGAGTCAAATATTGCAACA
CACTTCCAGATATTCCGTTTGATCCAAAGTTTATAAGATATCCGTTCGATGCCAACAGAT
TTGTCGATTACAAGCCTACATCACTTGAGAAACAACATAAGACCGAGCTTCATACCGACC
ATGACTTGGGTGTCGTCATTGACCTCATTAACCCTGATACTTATAAAGTGAACCCCAACA
CATGGATTCACCCGGCAGATGAAGCTTTACTTGAAGATGATTTACCCGCCCCACAAGACA
CTAAACGGTCAAAGCAACACAGTTTAAATGTATCTTGGTTAAGAAGAAGTGAATATATCT
CACAGGAATTCAACAGATATGGAGTGAAATCAACCAATGTGGAAACCAGGATTGGAGCCG
GTGCCAAAGAAATATTTCAAACAGGACGATCTTTATAAAGACAGAGACGGACAAATTGCT
GCCATTCAAAAAACTTTCGAAGACTCGAAAAAAGAAATCACTAAACATTACAGCAAACCT
AACGTGTTCCCTGTGGATGTGTTGCCTATATATCCAGATATGAAGATGTGGCAACATCCA
AGCGCGCAAGTTATCTTTGACACCGACCCTTCAGTGCAAGGCAAACCAGCTGCTGAACAA
CTTGAAGAAATGTCACAAGCCATGATTAGAGGAATGGTTGATGAGGAAGGCGATCAATTC
GTTGCTTACTTCCTCCCAACACCGTCTACTCGTCAGAAGAGGAAACGAGATGTTGAAGAA
GGAGTCGATTTTGAACCAGAGGAAACTTATGATTACAGCTGAAGAGACGGGCAACCCTGA
TGAATCGGAAGATGCTTCCAGCTCCGATGAGGATCAAGCAGAGGACAATAAAGAAGAAGA
AGAAATATTTGGAAGTGGGTCCTCCGATGAGGGGGATGAGGAACAATGATCATTATGATG
TCATACTTGGATGTTTCGTCTCATACATCAGCAGTGGTGTATCTGTGTTGGATTGGAAAA
CTTGTTTCTTTGCTTGGAGGATATTTTTGATGTAAAATATTCGGTTTTGCGCTAAATTTA
TTACAGTAGTAGTAATAACATGTGCGTAGATTTTTTCTTCCAAACTTTTTTGGGAAAACC
ATTCTCGCAGGGCATTTTTTACATTGGTTATCAATGTTGACCCGATATTTTTGTGTTTTG
CTGCTACAAAAAAGTGGTAACGTTTGATTTTTTTGCCAAGGATATTTTTCATGTGAAATA
TTTGGTTTTGCACTAAGTAGTACTAATAAGATGTATGCGAATTTTTTAACAAAATTTGCG
GGGATTTTAAGGCAAACTGGTAAATCTTACGAGCAGGGCATTTTTCAATCTATTTTCTAC
ATTTTGCTGCTAATGAAACAACTGATATCAAAGCTTAAGTGCAGAATCATATATATTACT
TTTGTTTAAAAGCAAGAGTGGCATATCACCTTTATCGTTGCCCTCATGTATATATCCTTA
TATACCAGGTGTGGTTACGTCACCTTTGATTTATTCACCTTGGTTTTGCACTTGTGTATA
GTAAGGAATATTTCTGAAATAAAACACAATCAAGGGTTTGATATTTAATAAAATCTGCAA
GATTGGTTTGTAAGAAGTAA

InterProScan

PANTHER
RNA_pol_II-assoc_Paf1 (IPR007133) - T[6-163] 3.8E-57
Pfam
RNA_pol_II-assoc_Paf1 (IPR007133) - T[31-167] 6.2E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAF1_HUMAN 57.055 % 201 1.2E-62