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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R167...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'Cisavi.CG.ENS81.R14....' > 
  4. Transcript 'KH2012:KH.L134.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L134.2.v1.A.nonSL4-1

Possible name(s)

PAF1

Gene model

KH2012:KH.L134.2

Location

KhL134 [202,555 / 208,706]

Sequences

Amino acid sequence

Length: 176

>KH.L134.2.v1.A.nonSL4-1
KVIRYVYNTLMAPTVQNSSSSSKGRTRGSIERGSGLVTRVKYCNTLPDIPFDPKFIRYPF
DANRFVDYKPTSLEKQHKTELHTDHDLGVVIDLINPDTYKVNPNTWIHPADEALLEDDLP
APQDTKRSKQHSLNVSWLRRSEYISQEFNRYGVKSTNVETRIGAGAKEIFQTGRSL

Nucleotide sequence

Length: 1,714

>KH2012:KH.L134.2.v1.A.nonSL4-1
GAAAGTGATTCGTTACGTTTATAATACACTTATGGCACCAACTGTACAAAATTCCAGTAG
CAGCAGTAAAGGAAGAACACGAGGTTCAATAGAAAGAGGAAGTGGATTGGTAACGAGAGT
CAAATATTGCAACACACTTCCAGATATTCCGTTTGATCCAAAGTTTATAAGATATCCGTT
CGATGCCAACAGATTTGTCGATTACAAGCCTACATCACTTGAGAAACAACATAAGACCGA
GCTTCATACCGACCATGACTTGGGTGTCGTCATTGACCTCATTAACCCTGATACTTATAA
AGTGAACCCCAACACATGGATTCACCCGGCAGATGAAGCTTTACTTGAAGATGATTTACC
CGCCCCACAAGACACTAAACGGTCAAAGCAACACAGTTTAAATGTATCTTGGTTAAGAAG
AAGTGAATATATCTCACAGGAATTCAACAGATATGGAGTGAAATCAACCAATGTGGAAAC
CAGGATTGGAGCCGGTGCCAAAGAAATATTTCAAACAGGACGATCTTTATAAAGACAGAG
ACGGACAAATTGCTGCCATTCAAAAAACTTTCGAAGACTCGAAAAAAGAAATCACTAAAC
ATTACAGCAAACCTAACGTGTTCCCTGTGGATGTGTTGCCTATATATCCAGATATGAAGA
TGTGGCAACATCCAAGCGCGCAAGTTATCTTTGACACCGACCCTTCAGTGCAAGGCAAAC
CAGCTGCTGAACAACTTGAAGAAATGTCACAAGCCATGATTAGAGGAATGGTTGATGAGG
AAGGCGATCAATTCGTTGCTTACTTCCTCCCAACACCGTCTACTCGTCAGAAGAGGAAAC
GAGATGTTGAAGAAGGAGTCGATTTTGAACCAGAGGAAACTTATGATTACAGCTGAAGAG
ACGGGCAACCCTGATGAATCGGAAGATGCTTCCAGCTCCGATGAGGATCAAGCAGAGGAC
AATAAAGAAGAAGAAGAAATATTTGGAAGTGGGTCCTCCGATGAGGGGGATGAGGAACAA
TGATCATTATGATGTCATACTTGGATGTTTCGTCTCATACATCAGCAGTGGTGTATCTGT
GTTGGATTGGAAAACTTGTTTCTTTGCTTGGAGGATATTTTTGATGTAAAATATTCGGTT
TTGCGCTAAATTTATTACAGTAGTAGTAATAACATGTGCGTAGATTTTTTCTTCCAAACT
TTTTTGGGAAAACCATTCTCGCAGGGCATTTTTTACATTGGTTATCAATGTTGACCCGAT
ATTTTTGTGTTTTGCTGCTACAAAAAAGTGGTAACGTTTGATTTTTTTGCCAAGGATATT
TTTCATGTGAAATATTTGGTTTTGCACTAAGTAGTACTAATAAGATGTATGCGAATTTTT
TAACAAAATTTGCGGGGATTTTAAGGCAAACTGGTAAATCTTACGAGCAGGGCATTTTTC
AATCTATTTTCTACATTTTGCTGCTAATGAAACAACTGATATCAAAGCTTAAGTGCAGAA
TCATATATATTACTTTTGTTTAAAAGCAAGAGTGGCATATCACCTTTATCGTTGCCCTCA
TGTATATATCCTTATATACCAGGTGTGGTTACGTCACCTTTGATTTATTCACCTTGGTTT
TGCACTTGTGTATAGTAAGGAATATTTCTGAAATAAAACACAATCAAGGGTTTGATATTT
AATAAAATCTGCAAGATTGGTTTGTAAGAAGTAA

InterProScan

PANTHER
RNA_pol_II-assoc_Paf1 (IPR007133) - T[11-168] 4.1E-57
Pfam
RNA_pol_II-assoc_Paf1 (IPR007133) - T[36-172] 6.8E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAF1_HUMAN 57.055 % 201 1.65E-62