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TRANSCRIPT CARD

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  1. Clone 'cicl052f08'
  2. Transcript 'KH2012:KH.L135.2.v2....'

Transcript Model

Transcript Id

KH2012:KH.L135.2.v2.A.nonSL4-2

Possible name(s)

DDX3X; DDX3Y; DDX4

Location

KhL135 [49,758 / 75,459]

Sequences

Amino acid sequence

Length: 681

>KH.L135.2.v2.A.nonSL4-2
VLSFKTVCVFCKLCAKTLNIAIMFDDDWEPAPLTALGNTDFRGASSFDNPYSKKDDGGFG
SGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRE
CPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGGDHAAQEYHKAGDGDKPRP
PLYIPPPPPEDEVEMFASMQRGINFGKYDAIPVEVSGLNAPKCISTFEMANLQETILVNV
QKAGYDRPTPVQKYSIPIINADRDLMACAQTGSGKTAAFLLPVLTKLVESGVKSSEFSEK
KTPQAIIIGPTRELVNQIFLEARKFSRSTIIHPVVVYGGTSVGYQIRAVQKGCDVLIATP
GRLMDFINRGLIGLENVRFIILDEADRMLDMGFESEIRKLVSLPGMPQKNNRHTLMFSAT
FPDEIQKLAHDFLREDFLFLTVGRVGGACSDVTQTVISVEWKDKRSKLLELIADVNETKS
RTLVFVETKRGADFLACVLCQEDFPTTSIHGDRLQQDREQALRDFKLAVCPILVATSVAA
RGLDIPKVEHVINYDMPREIDEYVHRIGRTGRCGNLGRATTFFDNKKDANLARSLVKILS
EAQQEVPGWLGECAESAVGSNFGAEKGRFGGKDLRERGGEGITGFGSMGGGSGARSTADY
DYNDGGGFDCVGVNDDDDSWD

Nucleotide sequence

Length: 2,587

>KH2012:KH.L135.2.v2.A.nonSL4-2
AAAGTTACCTAAAAGCGGGAAAGAGCGAAACGTGTCTTTTTGCAATGCATGTTGTGTGTG
CATGAGTTACAAGAAAATTTTAAGTTTTGTCATTTAAAACTGTGTGTGTTTTCTGCAAAC
TTTGCGCAAAAACTTTAAACATAGCAATCATGTTTGACGACGATTGGGAACCAGCACCTT
TAACCGCCCTTGGAAACACAGATTTTCGAGGTGCAAGTTCTTTTGATAACCCGTATTCCA
AGAAAGATGATGGTGGTTTTGGTTCAGGTTTTGGTGATAGCCGTGGAGGTGCACGCAGCA
AAGGTTGTTTTAAATGTGGAGAAGAAGGTCATATGTCCAGAGAATGCCCGCAGAACACTG
GATCAGGTTTTGGTGATAGCCGTGGAGGTGCACGCAGCAAAGGTTGTTTTAAATGTGGAG
AAGAAGGTCATATGTCCAGAGAATGCCCGCAGAACACTGGATCAGGTTTTGGTGATAGCC
GTGGAGGTGCACGCAGCAAAGGTTGTTTTAAATGTGGAGAAGAAGGTCATATGTCCAGAG
AATGCCCGCAGAACACTGGATCAGGTGGAGATCACGCTGCTCAGGAATATCATAAGGCTG
GAGACGGAGATAAACCTCGTCCTCCTCTGTACATTCCCCCCCCACCTCCTGAGGATGAGG
TTGAAATGTTTGCTAGCATGCAGCGAGGAATTAACTTTGGGAAGTACGATGCCATCCCTG
TGGAGGTGAGCGGACTCAACGCTCCGAAGTGCATTTCAACTTTCGAGATGGCAAACCTCC
AAGAAACAATACTGGTGAATGTGCAGAAAGCAGGTTATGACAGACCTACACCTGTGCAAA
AATACAGCATTCCCATTATTAATGCTGATCGTGACTTGATGGCATGTGCACAGACAGGAT
CTGGCAAAACGGCTGCGTTTTTGCTTCCGGTCCTTACTAAGCTGGTTGAATCGGGTGTAA
AGTCGTCTGAATTCAGTGAAAAGAAAACTCCACAAGCGATTATAATTGGCCCAACAAGAG
AACTTGTAAACCAGATTTTTCTGGAAGCCCGTAAATTCTCACGTAGCACCATTATTCATC
CAGTGGTTGTATATGGGGGCACCAGTGTTGGTTACCAAATAAGGGCTGTACAAAAAGGTT
GTGACGTATTGATCGCAACCCCTGGTCGTCTGATGGATTTTATTAACCGTGGCTTGATTG
GTCTGGAGAATGTTCGGTTCATTATCCTCGATGAAGCAGATCGGATGTTGGATATGGGGT
TCGAATCTGAGATCAGGAAGCTTGTATCTTTACCAGGGATGCCACAGAAGAACAATCGTC
ACACGCTTATGTTCAGCGCGACATTTCCAGATGAAATACAAAAACTTGCTCACGACTTTC
TCCGGGAGGACTTCCTGTTCCTCACAGTAGGAAGAGTAGGGGGAGCATGCTCCGATGTCA
CGCAAACAGTGATCTCCGTGGAGTGGAAAGACAAACGCTCCAAACTACTCGAGCTTATTG
CAGATGTTAATGAAACCAAGAGTCGTACTCTTGTTTTCGTGGAAACCAAGAGAGGAGCTG
ATTTCCTCGCTTGTGTTTTATGCCAAGAAGATTTCCCAACCACAAGCATCCATGGAGATC
GTTTACAACAAGATAGAGAGCAAGCACTCCGTGATTTCAAATTAGCAGTTTGTCCAATAC
TTGTTGCTACTTCAGTTGCTGCAAGAGGATTAGACATACCAAAGGTAGAGCATGTGATTA
ACTATGACATGCCGAGAGAAATAGATGAATATGTGCATCGAATCGGACGTACTGGTCGTT
GTGGTAACCTGGGACGCGCAACTACATTTTTTGACAACAAAAAAGACGCAAATCTGGCTC
GCTCACTTGTTAAAATTCTTTCCGAGGCTCAACAAGAAGTTCCAGGTTGGTTGGGGGAAT
GTGCAGAGTCTGCTGTTGGTTCGAATTTCGGAGCAGAAAAAGGAAGATTTGGTGGAAAAG
ACCTTCGGGAGAGAGGTGGAGAAGGGATTACTGGTTTCGGATCAATGGGTGGTGGAAGTG
GAGCAAGGAGCACTGCTGATTATGATTATAATGATGGTGGTGGTTTCGACTGTGTTGGTG
TGAATGACGATGATGACTCGTGGGATTAACTCTTATTGGAATTGAAAAGAAACCGAACAT
TGCCAAATATCTGAAAAAGATTCTACATTCTGTACCACTGTTTATTTTCTCTCCTTTTCA
CGGAGGTTACTTCTGTTGTTGGTTGTTTTTTCTGTGACTTCTGCACATAATGCATGTTCA
AATACCACTTACTGCTGGCTGCGCTAAGCTACGTACTTCCACCTACAGTGTTGATACGTC
AAGCTTGTCCATTGCAAACAATTTTGCAAAATCATGATGCTTCGTTTTTGAATCTGCTGT
TAGACTTCTTTATTTTGCTAGAAGTGGTTTTGCATAAAAATCTGTCATTATTATACAACA
GAGTGGTTGTAGCTGGTGCAGTCAAATTTGAATTTGATTATTGTGAGAATTTTTTATGTT
CACACACTTTTGTCTTTCATTTTCCCTTCTACGTGGAATTAAATACAACACTTCGTTATT
AGCTCTA

InterProScan

SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[63-93] 1.57E-6 - T[97-158] 4.26E-12
Pfam
Znf_CCHC (IPR001878) - T[74-90] 1.4E-7 - T[107-123] 1.4E-7 - T[140-156] 1.4E-7
SMART
Znf_CCHC (IPR001878) - T[74-90] 4.5E-6 - T[107-123] 4.5E-6 - T[140-156] 4.5E-6
ProSiteProfiles
Znf_CCHC (IPR001878) - T[75-90] 11.499 - T[108-123] 11.499 - T[141-156] 11.499
ProSiteProfiles
RNA_helicase_DEAD_Q_motif (IPR014014) - T[225-253] 10.521
SMART
Helicase_ATP-bd (IPR014001) - T[244-455] 1.9E-60
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[249-428] 4.7E-48
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[256-439] 31.685
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[303-587] 9.36E-70
ProSitePatterns
RNA-helicase_DEAD-box_CS (IPR000629) - T[381-389] .
CDD
Helicase_C (IPR001650) - T[451-582] 1.36358E-38
Pfam
Helicase_C (IPR001650) - T[464-574] 1.7E-28
ProSiteProfiles
Helicase_C (IPR001650) - T[467-614] 22.579
SMART
Helicase_C (IPR001650) - T[493-574] 6.8E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DDX3Y_HUMAN 53.092 % 472 1.49E-158
DDX3X_HUMAN 49.434 % 474 2.76E-159
DDX4_HUMAN 54.792 % 558 0