Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cign078f12' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Harore.CG.MTP2014.S2...' > 
  5. Transcript 'KH2012:KH.L135.2.v3....'

Transcript Model

Transcript Id

KH2012:KH.L135.2.v3.A.nonSL3-1

Possible name(s)

DDX3X; DDX3Y; DDX4

Gene model

KH2012:KH.L135.2

Location

KhL135 [49,794 / 64,979]

Sequences

Amino acid sequence

Length: 224

>KH.L135.2.v3.A.nonSL3-1
VLSFKTVCVFCKLCAKTLNIAIMFDDDWEPAPLTALGNTDFRGASSFDNPYSKKDDGGFG
SGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRE
CPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEE
GHMSRECPQNTGSVVFNFKSSVALRTDKVFLETIYSSVFCILLF

Nucleotide sequence

Length: 1,260

>KH2012:KH.L135.2.v3.A.nonSL3-1
TTTTTGCAATGCATGTTGTGTGTGCATGAGTTACAAGAAAATTTTAAGTTTTGTCATTTA
AAACTGTGTGTGTTTTCTGCAAACTTTGCGCAAAAACTTTAAACATAGCAATCATGTTTG
ACGACGATTGGGAACCAGCACCTTTAACCGCCCTTGGAAACACAGATTTTCGAGGTGCAA
GTTCTTTTGATAACCCGTATTCCAAGAAAGATGATGGTGGTTTTGGTTCAGGTTTTGGTG
ATAGCCGTGGAGGTGCACGCAGCAAAGGTTGTTTTAAATGTGGAGAAGAAGGTCATATGT
CCAGAGAATGCCCGCAGAACACTGGATCAGGTTTTGGTGATAGCCGTGGAGGTGCACGCA
GCAAAGGTTGTTTTAAATGTGGAGAAGAAGGTCATATGTCCAGAGAATGCCCGCAGAACA
CTGGATCAGGTTTTGGTGATAGCCGTGGAGGTGCACGCAGCAAAGGTTGTTTTAAATGTG
GAGAAGAAGGTCATATGTCCAGAGAATGCCCGCAGAACACTGGATCAGGTTTTGGTGATA
GCCGTGGAGGTGCACGCAGCAAAGGTTGTTTTAAATGTGGAGAAGAAGGTCATATGTCCA
GAGAATGCCCGCAGAACACTGGATCAGTGGTTTTCAACTTTAAATCAAGTGTTGCTTTGC
GCACAGACAAAGTATTCTTGGAAACTATCTATAGCAGCGTTTTCTGTATTCTACTCTTTT
AACAAGGTGCTTGTTAGATTTACCCTCAATATGTAATAGGTAATAACAGCAGAATTTTAG
TATTCGCGCAAACCCGAATATCGCAGGAAATTTGCGTGGGAATATTTATTACGAACGTGA
TAAAAATATAAAAGTTCATATCGATGCTCAACTTGTCAACACAACAGGTTGCTTTCGTGA
TTGCACCACAGTATGTGGAATTCATCAGCTGGGGTCTACTTTCTTTTAACTACGCTTTAA
CGATGTTTTAATTGTCTCCCTTTGATCATGCGTTTAATTATTGCAACAAGTTCAGTTGAG
CTGACAGATATTGCTTTATTTAAACTGATTTCGATATTTTGTAAATTACAGCCGATAACC
AAGATTTTAATGCACCTAAAAACTTTACGAAATGAAAACGAAAAATCTGATATAGCAGAT
AAAAATCAAACTACAGGCTCAATTACTATTAATTAGTTTTTAGTTAACTTGTAATTAATA
AATTGTTAATTTGTACTTGTTTTCAAATAAATTTTACCTCCCCTCCATTAAACAAACATT

InterProScan

SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[65-124] 1.74E-12 - T[131-158] 4.6E-10 - T[163-192] 1.7E-7
SMART
Znf_CCHC (IPR001878) - T[74-90] 4.5E-6 - T[107-123] 4.5E-6 - T[140-156] 4.5E-6 - T[173-189] 4.5E-6
Pfam
Znf_CCHC (IPR001878) - T[74-90] 3.7E-8 - T[107-123] 3.7E-8 - T[140-156] 3.7E-8 - T[173-189] 3.7E-8
ProSiteProfiles
Znf_CCHC (IPR001878) - T[75-90] 11.499 - T[108-123] 11.499 - T[141-156] 11.499 - T[174-189] 11.499

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value