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  1. Transcript 'KH2012:KH.C8.97.v2.A...'
  2. Transcript 'KH2012:KH.C11.339.v1...'
  3. Transcript 'KH2012:KH.C5.61.v5.A...'
  4. Transcript 'KH2012:KH.L137.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L137.2.v1.A.nonSL3-1

Possible name(s)

RNF139; RNF145; SYVN1

Location

KhL137 [36,549 / 45,326]

Sequences

Amino acid sequence

Length: 495

>KH.L137.2.v1.A.nonSL3-1
LLLVTNSRKNTETCITTILLQTSLALLTYKLWDRKPPFVGVVMWPILSWLTGYFQPSVLV
VLLQTMSYFALAGLLFCLFNSLVILRNHLRQFLLKCRMVITIFGWQAMLTWAREEYQIQH
LLVTCWLLRYFIQAYTNIHQQLNISNLNTDLFNHINVKVVNWKNAHIVTTMFMAAVQCMT
TTINLFGFVCIVKEVIKLQYFIIRSWLHCSFHNHPPDPVSDPLTGTIDGITFLIMSLYTD
ILNTDLEGRFLILIYILFTIASSQFQSIFNIIDPILMTLATAHNGTFWKHLRTVMLATVL
LFISGVLSYISFFTMSSTFWVFIIAYNYVNTFSLMLGSMSIYLVLMIDYHTLRGWQSLDD
VMFYIRGACRAVEFIVTLCMCGYIMMTFYMEMTSAAGIVMLAAYTYYCIVQRGGKGWKIW
MMRRQASCKVQSLPRATKEDLRNKSDLCPICYQMMESEVRVMHCKHYFHENCLKKWFYIQ
DKCPLCYAQFQSVAF

Nucleotide sequence

Length: 2,155

>KH2012:KH.L137.2.v1.A.nonSL3-1
GGTTGCTTCTTGTAACGAATAGTAGAAAAAATACCGAAACCTGCATTACTACCATTTTGC
TACAAACTTCACTTGCTCTTCTTACATACAAATTATGGGATCGTAAACCACCTTTTGTTG
GTGTCGTAATGTGGCCGATCTTATCATGGCTAACAGGATATTTCCAACCAAGTGTTTTGG
TGGTTTTGTTACAAACTATGTCATATTTTGCACTTGCGGGACTTTTATTTTGTTTATTTA
ACAGTTTGGTTATCTTACGAAACCACCTCCGGCAGTTTTTATTAAAATGTCGAATGGTAA
TTACAATATTTGGATGGCAAGCTATGCTGACATGGGCACGTGAAGAATATCAAATTCAGC
ATCTGCTTGTTACTTGCTGGTTGCTGCGATATTTTATTCAAGCTTACACAAACATTCATC
AACAACTCAACATTAGTAACTTGAACACAGACTTGTTTAACCACATCAATGTTAAAGTGG
TGAACTGGAAAAATGCTCATATAGTAACAACAATGTTTATGGCAGCAGTTCAGTGCATGA
CAACTACCATCAACTTGTTTGGATTTGTTTGCATAGTGAAGGAGGTCATCAAGCTGCAAT
ATTTTATAATAAGGTCATGGCTTCATTGTTCATTTCACAACCACCCACCAGATCCAGTCA
GCGACCCCTTAACTGGTACCATTGATGGAATTACTTTTCTTATAATGTCCCTTTACACTG
ATATTCTTAACACAGACCTAGAAGGAAGATTTCTTATTTTAATTTATATTTTATTCACAA
TTGCTTCATCACAATTTCAGAGTATCTTCAATATAATTGATCCAATTCTTATGACATTGG
CGACTGCTCACAATGGAACTTTTTGGAAACATCTTCGCACTGTCATGTTGGCAACTGTGT
TGTTATTCATATCTGGTGTTTTATCATATATCTCCTTTTTTACAATGAGTTCAACATTCT
GGGTGTTCATCATTGCGTACAATTATGTGAACACTTTCTCATTAATGCTGGGCTCAATGT
CAATTTACTTGGTTTTAATGATTGACTATCACACACTGCGTGGATGGCAGAGTTTGGATG
ATGTAATGTTTTACATACGAGGTGCATGTAGAGCTGTAGAGTTTATAGTTACGCTCTGTA
TGTGTGGATATATTATGATGACTTTCTACATGGAAATGACAAGTGCAGCAGGTATTGTAA
TGCTGGCTGCTTACACATATTACTGTATTGTCCAACGGGGTGGAAAGGGTTGGAAGATTT
GGATGATGAGAAGACAAGCTTCTTGTAAAGTTCAATCACTGCCAAGAGCAACCAAAGAAG
ATCTTCGAAATAAAAGTGATTTATGTCCAATTTGTTACCAGATGATGGAGAGCGAAGTAC
GGGTCATGCACTGCAAACATTATTTCCATGAGAATTGCCTTAAGAAGTGGTTCTACATTC
AAGATAAATGTCCGTTGTGCTACGCTCAGTTTCAATCAGTTGCTTTCTAACTTAAATAAG
CAATAAAACACCATTATTATAAAGTTTGTGACTACCCAATTTAAGAGTTAAAGTTTGTGA
CTACCCAATTAAAGAGTTAAAGTTTATGACTACTCATAAAGTCCTGGGGCAATGAAAGGT
TTAAAGACTGAGTTACAACATACGCCAGCTTGTGTCTCATTAAACCTTGCACCCTAATCT
CTGTGCAATATAGGCAGGTGTGTCATGGAACCAAACGTTACACATATCTATTCAAATGGC
CTGTTATTTAGGTAACCCAAGTAGCCAGTACATTTTATTTTACTTTTCAATGACCTGTTT
ATGTAGCATCAGCTAAATTTTTGTTTTGTTTAGATCAATTGGTTTTTTGTTCATTGTGCA
TCTAAAAAGCCTCAAATACTACAACACTTCAGCAACCCGTAATCCTAAATAATTTTACAA
TGATTCTTTCTACTTAAAACCATGTTTTGTGTTATTGGCTGCAATTACATGAAGTTGATA
AATTAACGATTTTAGTTGCTATATTCGGTACACCAAAACAAAATAAATCTTGCCGCTAAC
GAAACATTAACAGTGAAGACCATTATTGTAAAGCACTGTGACAAAGTTCATACCTTTTTC
TGGCTTTGCTACTACATATGGTGTATTTATAACAGAAAATACATGTAACTAAGCA

InterProScan

Pfam
TRC8_N_dom (IPR025754) - T[9-417] 1.8E-45
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[421-493] 3.2E-15
Pfam
Znf_RING (IPR001841) - T[447-486] 9.3E-10
ProSiteProfiles
Znf_RING (IPR001841) - T[448-486] 11.973
SMART
Znf_RING (IPR001841) - T[448-486] 8.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN139_HUMAN 26.551 % 153 2.57E-40
RN145_HUMAN 34.242 % 189 6.07E-53