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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C6.259.v1....' > 
  2. Transcript 'KH2012:KH.L137.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L137.2.v1.A.SL6-1

Possible name(s)

RNF139; RNF145; SYVN1

Gene model

KH2012:KH.L137.2

Location

KhL137 [36,549 / 45,051]

Sequences

Amino acid sequence

Length: 404

>KH.L137.2.v1.A.SL6-1
FLLKCRMVITIFGWQAMLTWAREEYQIQHLLVTCWLLRYFIQAYTNIHQQLNISNLNTDL
FNHINVKVVNWKNAHIVTTMFMAAVQCMTTTINLFGFVCIVKEVIKLQYFIIRSWLHCSF
HNHPPDPVSDPLTGTIDGITFLIMSLYTDILNTDLEGRFLILIYILFTIASSQFQSIFNI
IDPILMTLATAHNGTFWKHLRTVMLATVLLFISGVLSYISFFTMSSTFWVFIIAYNYVNT
FSLMLGSMSIYLVLMIDYHTLRGWQSLDDVMFYIRGACRAVEFIVTLCMCGYIMMTFYME
MTSAAGIVMLAAYTYYCIVQRGGKGWKIWMMRRQASCKVQSLPRATKEDLRNKSDLCPIC
YQMMESEVRVMHCKHYFHENCLKKWFYIQDKCPLCYAQFQSVAF

Nucleotide sequence

Length: 1,880

>KH2012:KH.L137.2.v1.A.SL6-1
TTTTTATTAAAATGTCGAATGGTAATTACAATATTTGGATGGCAAGCTATGCTGACATGG
GCACGTGAAGAATATCAAATTCAGCATCTGCTTGTTACTTGCTGGTTGCTGCGATATTTT
ATTCAAGCTTACACAAACATTCATCAACAACTCAACATTAGTAACTTGAACACAGACTTG
TTTAACCACATCAATGTTAAAGTGGTGAACTGGAAAAATGCTCATATAGTAACAACAATG
TTTATGGCAGCAGTTCAGTGCATGACAACTACCATCAACTTGTTTGGATTTGTTTGCATA
GTGAAGGAGGTCATCAAGCTGCAATATTTTATAATAAGGTCATGGCTTCATTGTTCATTT
CACAACCACCCACCAGATCCAGTCAGCGACCCCTTAACTGGTACCATTGATGGAATTACT
TTTCTTATAATGTCCCTTTACACTGATATTCTTAACACAGACCTAGAAGGAAGATTTCTT
ATTTTAATTTATATTTTATTCACAATTGCTTCATCACAATTTCAGAGTATCTTCAATATA
ATTGATCCAATTCTTATGACATTGGCGACTGCTCACAATGGAACTTTTTGGAAACATCTT
CGCACTGTCATGTTGGCAACTGTGTTGTTATTCATATCTGGTGTTTTATCATATATCTCC
TTTTTTACAATGAGTTCAACATTCTGGGTGTTCATCATTGCGTACAATTATGTGAACACT
TTCTCATTAATGCTGGGCTCAATGTCAATTTACTTGGTTTTAATGATTGACTATCACACA
CTGCGTGGATGGCAGAGTTTGGATGATGTAATGTTTTACATACGAGGTGCATGTAGAGCT
GTAGAGTTTATAGTTACGCTCTGTATGTGTGGATATATTATGATGACTTTCTACATGGAA
ATGACAAGTGCAGCAGGTATTGTAATGCTGGCTGCTTACACATATTACTGTATTGTCCAA
CGGGGTGGAAAGGGTTGGAAGATTTGGATGATGAGAAGACAAGCTTCTTGTAAAGTTCAA
TCACTGCCAAGAGCAACCAAAGAAGATCTTCGAAATAAAAGTGATTTATGTCCAATTTGT
TACCAGATGATGGAGAGCGAAGTACGGGTCATGCACTGCAAACATTATTTCCATGAGAAT
TGCCTTAAGAAGTGGTTCTACATTCAAGATAAATGTCCGTTGTGCTACGCTCAGTTTCAA
TCAGTTGCTTTCTAACTTAAATAAGCAATAAAACACCATTATTATAAAGTTTGTGACTAC
CCAATTTAAGAGTTAAAGTTTGTGACTACCCAATTAAAGAGTTAAAGTTTATGACTACTC
ATAAAGTCCTGGGGCAATGAAAGGTTTAAAGACTGAGTTACAACATACGCCAGCTTGTGT
CTCATTAAACCTTGCACCCTAATCTCTGTGCAATATAGGCAGGTGTGTCATGGAACCAAA
CGTTACACATATCTATTCAAATGGCCTGTTATTTAGGTAACCCAAGTAGCCAGTACATTT
TATTTTACTTTTCAATGACCTGTTTATGTAGCATCAGCTAAATTTTTGTTTTGTTTAGAT
CAATTGGTTTTTTGTTCATTGTGCATCTAAAAAGCCTCAAATACTACAACACTTCAGCAA
CCCGTAATCCTAAATAATTTTACAATGATTCTTTCTACTTAAAACCATGTTTTGTGTTAT
TGGCTGCAATTACATGAAGTTGATAAATTAACGATTTTAGTTGCTATATTCGGTACACCA
AAACAAAATAAATCTTGCCGCTAACGAAACATTAACAGTGAAGACCATTATTGTAAAGCA
CTGTGACAAAGTTCATACCTTTTTCTGGCTTTGCTACTACATATGGTGTATTTATAACAG
AAAATACATGTAACTAAGCA

InterProScan

Pfam
TRC8_N_dom (IPR025754) - T[4-326] 1.7E-42
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[330-403] 1.9E-15
Pfam
Znf_RING (IPR001841) - T[356-395] 7.1E-10
ProSiteProfiles
Znf_RING (IPR001841) - T[357-395] 11.973
SMART
Znf_RING (IPR001841) - T[357-395] 8.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN139_HUMAN 26.566 % 153 7.04E-41
RN145_HUMAN 34.242 % 188 9.01E-54