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TRANSCRIPT CARD

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  1. Transcript 'NCBI:KH.XM_018814314...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C5.290.v1....' > 
  4. Clone 'cicl029l14' > 
  5. Transcript 'KH2012:KH.L137.2.v2....'

Transcript Model

Transcript Id

KH2012:KH.L137.2.v2.A.SL1-1

Possible name(s)

RNF139; RNF145; SYVN1

Gene model

KH2012:KH.L137.2

Location

KhL137 [36,549 / 45,082]

Sequences

Amino acid sequence

Length: 394

>KH.L137.2.v2.A.SL1-1
LVILRNHLRQFLLKCRMVITIFGWQAMLTWAREEYQIQHLLVTCWLLRYFIQAYTNIHQQ
LNISNLNTDLFNHINVKVVNWKNAHIVTTMFMAAVQCMTTTINLFGFVCIVKEVIKLQYF
IIRSWLHCSFHNHPPDPVSDPLTDLEGRFLILIYILFTIASSQFQSIFNIIDPILMTLAT
AHNGTFWKHLRTVMLATVLLFISGVLSYISFFTMSSTFWVFIIAYNYVNTFSLMLGSMSI
YLVLMIDYHTLRGWQSLDDVMFYIRGACRAVEFIVTLCMCGYIMMTFYMEMTSAAGIVML
AAYTYYCIVQRGGKGWKIWMMRRQASCKVQSLPRATKEDLRNKSDLCPICYQMMESEVRV
MHCKHYFHENCLKKWFYIQDKCPLCYAQFQSVAF

Nucleotide sequence

Length: 1,851

>KH2012:KH.L137.2.v2.A.SL1-1
TTTGGTTATCTTACGAAACCACCTCCGGCAGTTTTTATTAAAATGTCGAATGGTAATTAC
AATATTTGGATGGCAAGCTATGCTGACATGGGCACGTGAAGAATATCAAATTCAGCATCT
GCTTGTTACTTGCTGGTTGCTGCGATATTTTATTCAAGCTTACACAAACATTCATCAACA
ACTCAACATTAGTAACTTGAACACAGACTTGTTTAACCACATCAATGTTAAAGTGGTGAA
CTGGAAAAATGCTCATATAGTAACAACAATGTTTATGGCAGCAGTTCAGTGCATGACAAC
TACCATCAACTTGTTTGGATTTGTTTGCATAGTGAAGGAGGTCATCAAGCTGCAATATTT
TATAATAAGGTCATGGCTTCATTGTTCATTTCACAACCACCCACCAGATCCAGTCAGCGA
CCCCTTAACTGACCTAGAAGGAAGATTTCTTATTTTAATTTATATTTTATTCACAATTGC
TTCATCACAATTTCAGAGTATCTTCAATATAATTGATCCAATTCTTATGACATTGGCGAC
TGCTCACAATGGAACTTTTTGGAAACATCTTCGCACTGTCATGTTGGCAACTGTGTTGTT
ATTCATATCTGGTGTTTTATCATATATCTCCTTTTTTACAATGAGTTCAACATTCTGGGT
GTTCATCATTGCGTACAATTATGTGAACACTTTCTCATTAATGCTGGGCTCAATGTCAAT
TTACTTGGTTTTAATGATTGACTATCACACACTGCGTGGATGGCAGAGTTTGGATGATGT
AATGTTTTACATACGAGGTGCATGTAGAGCTGTAGAGTTTATAGTTACGCTCTGTATGTG
TGGATATATTATGATGACTTTCTACATGGAAATGACAAGTGCAGCAGGTATTGTAATGCT
GGCTGCTTACACATATTACTGTATTGTCCAACGGGGTGGAAAGGGTTGGAAGATTTGGAT
GATGAGAAGACAAGCTTCTTGTAAAGTTCAATCACTGCCAAGAGCAACCAAAGAAGATCT
TCGAAATAAAAGTGATTTATGTCCAATTTGTTACCAGATGATGGAGAGCGAAGTACGGGT
CATGCACTGCAAACATTATTTCCATGAGAATTGCCTTAAGAAGTGGTTCTACATTCAAGA
TAAATGTCCGTTGTGCTACGCTCAGTTTCAATCAGTTGCTTTCTAACTTAAATAAGCAAT
AAAACACCATTATTATAAAGTTTGTGACTACCCAATTTAAGAGTTAAAGTTTGTGACTAC
CCAATTAAAGAGTTAAAGTTTATGACTACTCATAAAGTCCTGGGGCAATGAAAGGTTTAA
AGACTGAGTTACAACATACGCCAGCTTGTGTCTCATTAAACCTTGCACCCTAATCTCTGT
GCAATATAGGCAGGTGTGTCATGGAACCAAACGTTACACATATCTATTCAAATGGCCTGT
TATTTAGGTAACCCAAGTAGCCAGTACATTTTATTTTACTTTTCAATGACCTGTTTATGT
AGCATCAGCTAAATTTTTGTTTTGTTTAGATCAATTGGTTTTTTGTTCATTGTGCATCTA
AAAAGCCTCAAATACTACAACACTTCAGCAACCCGTAATCCTAAATAATTTTACAATGAT
TCTTTCTACTTAAAACCATGTTTTGTGTTATTGGCTGCAATTACATGAAGTTGATAAATT
AACGATTTTAGTTGCTATATTCGGTACACCAAAACAAAATAAATCTTGCCGCTAACGAAA
CATTAACAGTGAAGACCATTATTGTAAAGCACTGTGACAAAGTTCATACCTTTTTCTGGC
TTTGCTACTACATATGGTGTATTTATAACAGAAAATACATGTAACTAAGCA

InterProScan

Pfam
TRC8_N_dom (IPR025754) - T[145-316] 1.0E-32
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[320-393] 1.8E-15
Pfam
Znf_RING (IPR001841) - T[346-385] 6.9E-10
ProSiteProfiles
Znf_RING (IPR001841) - T[347-385] 11.973
SMART
Znf_RING (IPR001841) - T[347-385] 8.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN139_HUMAN 32.432 % 145 2.85E-38
RN145_HUMAN 37.652 % 172 5.26E-48