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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.374.v2....' > 
  2. Transcript 'KH2012:KH.C10.507.v1...' > 
  3. Transcript 'KH2012:KH.L3.1.v1.A....' > 
  4. Transcript 'KH2012:KH.L137.2.v2....'

Transcript Model

Transcript Id

KH2012:KH.L137.2.v2.A.SL6-1

Possible name(s)

RNF139; RNF145; SYVN1

Gene model

KH2012:KH.L137.2

Location

KhL137 [36,549 / 45,051]

Sequences

Amino acid sequence

Length: 384

>KH.L137.2.v2.A.SL6-1
FLLKCRMVITIFGWQAMLTWAREEYQIQHLLVTCWLLRYFIQAYTNIHQQLNISNLNTDL
FNHINVKVVNWKNAHIVTTMFMAAVQCMTTTINLFGFVCIVKEVIKLQYFIIRSWLHCSF
HNHPPDPVSDPLTDLEGRFLILIYILFTIASSQFQSIFNIIDPILMTLATAHNGTFWKHL
RTVMLATVLLFISGVLSYISFFTMSSTFWVFIIAYNYVNTFSLMLGSMSIYLVLMIDYHT
LRGWQSLDDVMFYIRGACRAVEFIVTLCMCGYIMMTFYMEMTSAAGIVMLAAYTYYCIVQ
RGGKGWKIWMMRRQASCKVQSLPRATKEDLRNKSDLCPICYQMMESEVRVMHCKHYFHEN
CLKKWFYIQDKCPLCYAQFQSVAF

Nucleotide sequence

Length: 1,820

>KH2012:KH.L137.2.v2.A.SL6-1
TTTTTATTAAAATGTCGAATGGTAATTACAATATTTGGATGGCAAGCTATGCTGACATGG
GCACGTGAAGAATATCAAATTCAGCATCTGCTTGTTACTTGCTGGTTGCTGCGATATTTT
ATTCAAGCTTACACAAACATTCATCAACAACTCAACATTAGTAACTTGAACACAGACTTG
TTTAACCACATCAATGTTAAAGTGGTGAACTGGAAAAATGCTCATATAGTAACAACAATG
TTTATGGCAGCAGTTCAGTGCATGACAACTACCATCAACTTGTTTGGATTTGTTTGCATA
GTGAAGGAGGTCATCAAGCTGCAATATTTTATAATAAGGTCATGGCTTCATTGTTCATTT
CACAACCACCCACCAGATCCAGTCAGCGACCCCTTAACTGACCTAGAAGGAAGATTTCTT
ATTTTAATTTATATTTTATTCACAATTGCTTCATCACAATTTCAGAGTATCTTCAATATA
ATTGATCCAATTCTTATGACATTGGCGACTGCTCACAATGGAACTTTTTGGAAACATCTT
CGCACTGTCATGTTGGCAACTGTGTTGTTATTCATATCTGGTGTTTTATCATATATCTCC
TTTTTTACAATGAGTTCAACATTCTGGGTGTTCATCATTGCGTACAATTATGTGAACACT
TTCTCATTAATGCTGGGCTCAATGTCAATTTACTTGGTTTTAATGATTGACTATCACACA
CTGCGTGGATGGCAGAGTTTGGATGATGTAATGTTTTACATACGAGGTGCATGTAGAGCT
GTAGAGTTTATAGTTACGCTCTGTATGTGTGGATATATTATGATGACTTTCTACATGGAA
ATGACAAGTGCAGCAGGTATTGTAATGCTGGCTGCTTACACATATTACTGTATTGTCCAA
CGGGGTGGAAAGGGTTGGAAGATTTGGATGATGAGAAGACAAGCTTCTTGTAAAGTTCAA
TCACTGCCAAGAGCAACCAAAGAAGATCTTCGAAATAAAAGTGATTTATGTCCAATTTGT
TACCAGATGATGGAGAGCGAAGTACGGGTCATGCACTGCAAACATTATTTCCATGAGAAT
TGCCTTAAGAAGTGGTTCTACATTCAAGATAAATGTCCGTTGTGCTACGCTCAGTTTCAA
TCAGTTGCTTTCTAACTTAAATAAGCAATAAAACACCATTATTATAAAGTTTGTGACTAC
CCAATTTAAGAGTTAAAGTTTGTGACTACCCAATTAAAGAGTTAAAGTTTATGACTACTC
ATAAAGTCCTGGGGCAATGAAAGGTTTAAAGACTGAGTTACAACATACGCCAGCTTGTGT
CTCATTAAACCTTGCACCCTAATCTCTGTGCAATATAGGCAGGTGTGTCATGGAACCAAA
CGTTACACATATCTATTCAAATGGCCTGTTATTTAGGTAACCCAAGTAGCCAGTACATTT
TATTTTACTTTTCAATGACCTGTTTATGTAGCATCAGCTAAATTTTTGTTTTGTTTAGAT
CAATTGGTTTTTTGTTCATTGTGCATCTAAAAAGCCTCAAATACTACAACACTTCAGCAA
CCCGTAATCCTAAATAATTTTACAATGATTCTTTCTACTTAAAACCATGTTTTGTGTTAT
TGGCTGCAATTACATGAAGTTGATAAATTAACGATTTTAGTTGCTATATTCGGTACACCA
AAACAAAATAAATCTTGCCGCTAACGAAACATTAACAGTGAAGACCATTATTGTAAAGCA
CTGTGACAAAGTTCATACCTTTTTCTGGCTTTGCTACTACATATGGTGTATTTATAACAG
AAAATACATGTAACTAAGCA

InterProScan

Pfam
TRC8_N_dom (IPR025754) - T[135-306] 9.8E-33
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[310-383] 1.7E-15
Pfam
Znf_RING (IPR001841) - T[336-375] 6.7E-10
ProSiteProfiles
Znf_RING (IPR001841) - T[337-375] 11.973
SMART
Znf_RING (IPR001841) - T[337-375] 8.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN139_HUMAN 32.432 % 145 2.66E-38
RN145_HUMAN 37.652 % 172 4.41E-48