- Region 'REG00000305' >
- Region 'REG00000413' >
- Transcript 'KH2012:KH.C7.770.v1....' >
- Transcript 'KH2012:KH.L142.14.v1...'
Transcript Model
Transcript Id
KH2012:KH.L142.14.v1.A.ND1-1
Possible name(s)
EMX1; EMX2; VAX1
Gene model
Location
KhL142 [5,479 / 9,956]
Amino acid sequence
Length: 472
>KH.L142.14.v1.A.ND1-1
NLNSRFAFLIKQNRMILNQSHPPNQVGDRGSYLTQHKTGFDIASLVSSDPKTSPKLSVTS
SHSEILEKLYKSGNFNSGRFHPYSTSPQKSMSRANLTSSSPDSGSDDYHRHKKYRRHRDS
NPRSPDSTQDHTTTRNERLTPDAPTSPHNERKSPRDPYRPFSGSNLPSYMHNTPLAAAMA
AGVLPFPLTPFGGQLPPTTVPPSPTVTPPYHTSPTPTRQTTPKPHPPNPLPSPPTDPVTL
ERISRQAFIQAATSSLNPPPFSIPPGFQQTCLQRYPGSPPNHQFDQVAGLALRGAFGAPH
PPLPPTAPYNPWLLRHASATSSRPFPPHFADPLLRARFGLLMANPFQRKPKRIRTAFTPG
QLLRLEHEFDKNHYVVGAERKQLANNLKLTETQVKVWFQNRRTKFKRQRIEEKGSGKGEV
PQDYVISEDEEFDDEEEVTYPPVNQASINQNDIQEPGFKASNDCDVTQASMT
Nucleotide sequence
Length: 1,882
>KH2012:KH.L142.14.v1.A.ND1-1
TTGCGTTCGAGATATTTTAGTTTTTAAAAATAGATTTAAGTATTTTTTTCGACAATTGTT
TGCATTTTTATACCATCAGCCGTAATAGTAGAAACAAGGATATTTCGTTGCGGATTCAGT
CGTTACAATTTTTAGATCAATGCTATTTCAGTTTTAAAAACTATTCTTAGCTATTTTACC
AAAAACACAACGAGTTGCTGTTTTTATAGACTTAAAACAGATACGGCAGTTTAGCGTATA
TACGAATTGAATTAAACAATTATATAAAATATTCTAACATTTACTTATTTTTAGAATCTG
AATAGCCGTTTCGCGTTTCTGATCAAACAGAACAGAATGATTCTTAACCAATCCCACCCC
CCTAATCAAGTAGGTGACCGCGGTTCGTATCTCACCCAGCATAAAACCGGATTCGACATC
GCGTCACTGGTGTCATCGGACCCAAAGACGTCACCAAAGCTATCTGTGACGTCATCCCAC
AGCGAGATTTTGGAAAAACTTTATAAAAGCGGGAATTTCAACTCTGGTAGGTTCCACCCG
TACAGTACATCACCCCAGAAGTCGATGTCAAGAGCGAACCTGACTTCATCAAGCCCCGAC
AGCGGTTCCGACGATTACCACAGGCATAAAAAGTATCGGCGACACCGGGATTCGAACCCA
AGGTCCCCGGATTCCACCCAAGACCACACAACCACTAGGAACGAGCGATTAACCCCCGAT
GCCCCAACTTCGCCGCATAATGAACGCAAATCCCCAAGGGACCCCTACCGTCCCTTCAGC
GGGTCTAACCTTCCATCTTACATGCATAACACCCCGTTAGCAGCTGCAATGGCGGCAGGG
GTGCTCCCATTCCCTCTTACCCCATTCGGGGGGCAACTACCTCCAACTACAGTCCCCCCA
TCACCAACCGTTACCCCACCCTACCACACCTCCCCTACCCCGACCCGACAGACAACCCCG
AAACCCCACCCCCCTAATCCCCTACCCTCCCCGCCCACCGACCCCGTCACGCTTGAACGA
ATTTCCCGCCAAGCTTTCATCCAAGCTGCCACGTCATCCCTCAACCCTCCGCCATTTTCG
ATCCCACCAGGATTCCAACAAACTTGTCTTCAGAGATACCCTGGTTCGCCCCCAAACCAC
CAATTCGACCAAGTTGCTGGGTTAGCTCTACGTGGGGCGTTCGGAGCCCCCCACCCTCCT
TTGCCCCCCACGGCCCCCTACAACCCGTGGTTATTACGTCACGCATCTGCTACGTCATCA
AGACCGTTCCCGCCACACTTTGCTGACCCTCTACTACGCGCGAGGTTCGGCTTATTGATG
GCGAATCCATTTCAACGAAAACCGAAGCGGATTCGAACCGCGTTTACACCGGGTCAACTG
TTAAGACTTGAACACGAGTTTGATAAAAACCATTACGTGGTTGGAGCTGAACGTAAACAA
CTTGCAAATAACCTCAAGTTGACGGAAACTCAGGTGAAAGTTTGGTTCCAGAATCGTCGA
ACGAAGTTCAAGCGACAACGAATCGAAGAGAAAGGTAGCGGGAAAGGGGAAGTCCCCCAG
GATTACGTCATATCCGAGGACGAAGAATTCGACGACGAAGAGGAAGTGACGTATCCACCT
GTCAATCAAGCGTCAATCAATCAAAATGACATTCAGGAACCCGGGTTTAAAGCGTCGAAC
GATTGTGACGTAACGCAAGCGTCTATGACGTAATAATAAGATCATTGTTTGTATCGAGAT
GCATGTTGCTGTAGTAGTTCGTTCCATACGTCATCGTTACGTCATAAACTGCGAAATGCG
TAGTTGTATGACGTCACAAACAATGACGTCATTGTCGTAACTTTTGTTTCGAGATTTGAA
TAAAAATAAGATTTCTATAAAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[335-409] 3.42E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[348-408] 20.552 |
| SMART |
Homeobox_dom (IPR001356) - T[350-412] 1.7E-25 |
| Pfam |
Homeobox_dom (IPR001356) - T[351-407] 5.6E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[351-409] 7.5466E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[372-383] 7.0E-5 - T[387-397] 7.0E-5 - T[397-406] 7.0E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[383-406] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAX1_HUMAN | 66.102 % | 85.9 | 2.05E-18 |
| EMX2_HUMAN | 78.947 % | 131 | 2.22E-35 |
| EMX1_HUMAN | 64.706 % | 132 | 1.46E-35 |