- Region 'REG00000681' >
- Transcript 'KH2012:KH.C11.46.v1....' >
- Transcript 'Cisavi.CG.ENS81.R5.5...' >
- Clone 'AHC0AAA136YF06' >
- Transcript 'KH2012:KH.L147.11.v1...'
Transcript Model
Transcript Id
KH2012:KH.L147.11.v1.A.SL1-1
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
KhL147 [187,890 / 202,207]
Amino acid sequence
Length: 1,047
>KH.L147.11.v1.A.SL1-1
HVSCVSTLFKMANETGNVPDEDKHEKLLRILKSQVKAIMEEAVTKKFVHEESPHVLRLCG
TVETCFLDGLRKRTAGFLRSNKIASLFTKVGKGVPQVAELVTKIEEIETNMNKPPSQDVS
LSQNNNAHNKKHLWIRIALISKILDKIAEHLVDHSAKYYESSSIMANPLSGRLISAILVG
PCALDFTKMKTHDHYWSDPPAGELIQRHKLHSRHASPSSPGRRPALHFTPVRHQSSSDSM
EKGTSFRDYVESLHQNSKMTLLYGKNNVMVQPQEDIGLIPGYLSLHQEASCMLVKWTPNQ
LMNVNHDVKSRESSHEASQEVPDTSSYWEFAISVDVRDIVYLHCHQQLDKSGTLVLVGQD
GVQWPPIRFPPGGHLLSFLSCLETGLLPHGHLDPPLWSEKGKGKVFPRLRRKSSRKSTSS
TESDEPTDFVFRVSTSSDSSYISSHHTPHEATFDLMKSIFTLPQLWKTPRTKSTSTIQSN
KRNSSYEISRSVVIRPAMLESDYFYIQPQKKNSPRIISSAKRCSLPKSHKISEPYAGHCM
VVMSSLKVLCDTMRRQIISRAFYGWLAHCRHLMTVRTHLSEMVHNQVISPTLPTDATRGV
NQTTWKEIFIYGKLTSMTELMRHTYFGGVDHDLRPIVWLFLLEHYPPDTDEEDREEIDRQ
MEEQYQVIMKQWTFVEDIINQRQLKSSERASSCSTSSSESPPVVQPILRQQSSNLSDVFT
NDDQQTINKKNIEKYKVIDETKISEGKSVSFEDEHIESSTSSHIPYSSISSTRTDQHSSV
SMKSISTDETVQGGGGDVELEGSPETTNTTADDETTDKEVDYTVELLDTFALNLHRIDKD
VQRCDRNHPYFMHEDNLVKLRNIMSCYVWKNLEVGYMQGMCDLAAPLLVVLDNESLVYDC
FVSLMKRMGSNFPNGGAMDSHFANMRSLIQILDGELFEHMHKNGDYTHFYFCYRWFLLDF
KRELSYDGDVFSVWERIWSANYCSSNNFVLFFALAMLQTYRDIILENDMDFTDIIKFFNE
MAECHDAEKLIQLAQELVAEVQIMIHK
Nucleotide sequence
Length: 3,553
>KH2012:KH.L147.11.v1.A.SL1-1
CAATTATAGTAAGCAAGTAAGGTAGTTGATTATAAATTTAACCAGATATGTGTTGCATTA
GTATGGGCTGTTAACACGTTAGCTGCGTTTCAACGTTGTTTAAAATGGCAAACGAAACTG
GAAATGTACCAGATGAAGACAAACATGAAAAACTACTTCGGATTCTTAAAAGTCAGGTTA
AAGCCATCATGGAGGAAGCTGTGACGAAGAAGTTTGTTCACGAAGAAAGTCCGCATGTTC
TAAGATTGTGTGGAACTGTGGAAACTTGTTTTCTTGATGGACTAAGGAAACGAACGGCTG
GATTTCTACGATCCAACAAAATCGCTTCCTTGTTCACAAAAGTTGGAAAGGGAGTTCCAC
AAGTTGCAGAACTTGTGACTAAGATTGAAGAAATTGAAACCAATATGAACAAACCCCCGT
CACAAGATGTCTCACTTTCACAAAACAACAACGCACATAACAAGAAACATCTTTGGATAC
GAATTGCCCTCATTTCAAAAATCCTTGATAAAATAGCAGAACATTTGGTTGACCACAGCG
CCAAATATTACGAGTCTTCATCTATAATGGCCAACCCTTTGAGTGGAAGATTGATTTCCG
CAATACTTGTTGGTCCTTGTGCATTGGACTTCACCAAGATGAAAACTCATGATCATTATT
GGTCAGATCCACCAGCTGGTGAACTTATTCAACGACATAAACTTCATAGCAGACACGCCT
CCCCGAGTTCCCCAGGACGACGCCCAGCTCTCCACTTCACTCCAGTGCGTCACCAGTCAT
CTTCCGATTCCATGGAGAAGGGAACCTCGTTCAGGGATTACGTGGAGTCTTTGCATCAGA
ACTCCAAGATGACGCTTTTGTACGGGAAGAATAATGTCATGGTTCAGCCTCAAGAAGACA
TTGGTTTGATACCTGGTTATTTATCTTTGCATCAAGAAGCCAGTTGTATGTTGGTTAAAT
GGACTCCTAACCAACTCATGAATGTGAATCATGATGTGAAATCACGTGAATCATCTCATG
AGGCATCACAAGAAGTACCTGATACAAGTTCATATTGGGAGTTTGCGATATCTGTTGATG
TTCGGGACATCGTGTATCTACATTGCCATCAACAATTAGACAAGAGTGGAACGTTGGTAT
TAGTTGGTCAAGATGGCGTACAATGGCCTCCCATACGTTTCCCCCCCGGTGGTCACTTAT
TATCATTCCTATCGTGTCTTGAAACCGGACTTCTTCCTCACGGACATCTTGATCCTCCGC
TCTGGTCTGAAAAAGGGAAGGGCAAAGTATTTCCTCGATTGCGACGAAAATCTTCAAGAA
AATCGACTTCGAGCACTGAGTCTGACGAACCAACAGATTTTGTATTTCGCGTTAGCACTT
CATCGGATAGCAGTTATATATCATCTCATCATACACCACATGAAGCAACATTTGATCTCA
TGAAATCAATATTCACGTTACCCCAACTATGGAAGACCCCACGTACCAAATCTACCTCAA
CCATCCAAAGCAATAAACGAAACTCAAGTTACGAGATCTCACGTTCTGTAGTGATACGAC
CTGCTATGTTGGAAAGTGACTACTTTTACATACAACCTCAGAAAAAAAACTCCCCAAGAA
TAATTTCGTCGGCAAAAAGATGTTCGCTTCCAAAATCGCACAAAATATCCGAACCATACG
CAGGTCATTGCATGGTTGTGATGTCCTCACTTAAGGTCTTATGTGACACAATGAGACGAC
AAATTATTTCCCGAGCTTTTTACGGATGGTTAGCTCACTGTCGCCACCTAATGACAGTTC
GTACCCACTTGTCGGAGATGGTTCATAACCAAGTGATCTCACCCACCTTACCAACTGACG
CCACGCGAGGTGTCAATCAAACTACCTGGAAGGAAATATTCATCTATGGGAAGTTAACAA
GCATGACTGAGTTGATGCGACACACGTACTTCGGAGGTGTTGATCACGATCTTCGTCCAA
TAGTTTGGTTGTTCCTCCTGGAACATTATCCTCCGGACACAGATGAGGAAGATCGGGAGG
AAATTGATCGGCAGATGGAGGAACAATATCAAGTTATTATGAAACAATGGACTTTTGTGG
AAGACATAATAAACCAGCGTCAATTAAAATCATCGGAACGAGCGTCTTCATGTTCGACGT
CGAGCAGCGAATCGCCACCCGTGGTTCAACCAATTCTTCGACAACAATCGTCGAATCTTA
GCGATGTTTTCACCAACGATGATCAACAAACTATCAACAAGAAGAATATTGAGAAATACA
AAGTGATTGACGAGACGAAGATTAGTGAGGGGAAGTCGGTTTCGTTCGAAGATGAACATA
TTGAGTCCAGCACATCAAGTCACATTCCATATTCATCTATCAGTTCAACAAGGACTGACC
AACATTCGTCTGTTTCAATGAAAAGTATTAGCACCGATGAAACTGTGCAAGGGGGTGGGG
GAGATGTAGAATTGGAAGGTTCTCCAGAAACAACAAACACAACAGCTGATGATGAAACTA
CTGATAAAGAAGTTGATTATACTGTCGAGTTACTGGACACGTTTGCGTTAAACTTACATC
GGATCGACAAAGACGTTCAACGTTGTGATCGCAACCATCCTTATTTCATGCACGAGGATA
ACTTGGTTAAACTACGGAATATAATGTCGTGTTATGTTTGGAAGAACCTGGAAGTTGGAT
ATATGCAGGGCATGTGTGACTTGGCAGCACCGCTTCTTGTAGTGCTTGATAACGAAAGTT
TGGTTTACGATTGTTTCGTTTCTCTCATGAAACGAATGGGAAGCAATTTTCCAAACGGTG
GCGCTATGGATTCACATTTCGCTAATATGAGGTCATTAATACAGATACTCGATGGTGAAT
TATTTGAACACATGCATAAGAATGGAGATTACACACATTTCTATTTCTGCTACAGATGGT
TTCTACTGGATTTTAAAAGAGAGTTATCATATGATGGGGACGTGTTCAGTGTTTGGGAGC
GAATATGGTCGGCTAACTACTGTTCATCGAATAACTTTGTTTTGTTCTTTGCGCTTGCAA
TGCTACAAACATACAGAGATATTATCCTGGAAAATGATATGGATTTCACGGATATTATTA
AATTTTTTAATGAGATGGCTGAATGTCATGATGCAGAAAAACTCATTCAACTCGCTCAAG
AACTAGTTGCTGAAGTTCAAATAATGATACACAAATAATACCTAACTGTTCCAATATGTT
GTACTGTGGTACTAAAAAAATTAACCTTTTTTTTGTAATTTTTTTATTGTGATTTGTAAA
TTTGCCACACAAGATTACGTTTTGCACAGATTTTGAACCGAATATTTTATTTGCAGTAAT
TTTGTTTAAAAATCGAATTTTTAAAATTTCAATTAAAATTTTTTGATTTTTTGAATTTAG
ATTTTATTTTGTCACCTTGCATAGTGCAATACCATACGTGAAGGGAATTTGTTTTTATTT
ATTTATATTGTAACTGCTGTGAAATATGTTGTGCTGTTGTTTTTGTGGCAGAATAAAATC
GTGTTGCAGTCAT
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[23-187] 2.75E-26 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[49-194] 19.563 |
| Pfam |
Run_dom (IPR004012) - T[57-191] 3.5E-26 |
| SMART |
Run_dom (IPR004012) - T[131-191] 3.1E-10 |
| CDD |
SGSM1/2 (IPR037745) - T[260-433] 3.76303E-77 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[604-667] 7.06E-43 - T[820-939] 7.06E-43 - T[916-1038] 3.92E-28 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[625-1008] 3.4E-35 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[628-981] 29.77 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[815-1004] 6.3E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 44.212 % | 595 | 0 |
| SGSM2_HUMAN | 46.168 % | 475 | 3.25E-151 |
| TBC15_HUMAN | 33.824 % | 130 | 4.21E-31 |