- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'KH2012:KH.C10.84.v2....' >
- Transcript 'KH2012:KH.L147.11.v2...'
Transcript Model
Transcript Id
KH2012:KH.L147.11.v2.A.SL1-1
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
KhL147 [187,890 / 202,207]
Amino acid sequence
Length: 985
>KH.L147.11.v2.A.SL1-1
HVSCVSTLFKMANETGNVPDEDKHEKLLRILKSQVKAIMEEAVTKKFVHEESPHVLRLCG
TVETCFLDGLRKRTAGFLRSNKIASLFTKVGKGVPQVAELVTKIEEIETNMNKPPSQDVS
LSQNNNAHNKKHLWIRIALISKILDKIAEHLVDHSAKYYESSSIMANPLSGRLISAILVG
PCALDFTKMKTHDHYWSDPPAGELIQRHKLHSRHASPSSPGRRPALHFTPVRHQSSSDSM
EKGTSFRDYVESLHQNSKMTLLYGKNNVMVQPQEDIGLIPGYLSLHQEASCMLVKWTPNQ
LMNVNHDVKSRESSHEASQEVPDTSSYWEFAISVDVRDIVYLHCHQQLDKSGTLVLVGQD
GVQWPPIRFPPGGHLLSFLSCLETGLLPHGHLDPPLWSEKGKGKVFPRLRRKSSRKSTSS
TESDEPTDFVFRVSTSSDSSCTWDSSDGYVPHLDMYVYDNQQPRHYNVTSSRNGTPSTDI
QSSLKVLCDTMRRQIISRAFYGWLAHCRHLMTVRTHLSEMVHNQVISPTLPTDATRGVNQ
TTWKEIFIYGKLTSMTELMRHTYFGGVDHDLRPIVWLFLLEHYPPDTDEEDREEIDRQME
EQYQVIMKQWTFVEDIINQRQLKSSERASSCSTSSSESPPVVQPILRQQSSNLSDVFTND
DQQTINKKNIEKYKVIDETKISEGKSVSFEDEHIESSTSSHIPYSSISSTRTDQHSSVSM
KSISTDETVQGGGGDVELEGSPETTNTTADDETTDKEVDYTVELLDTFALNLHRIDKDVQ
RCDRNHPYFMHEDNLVKLRNIMSCYVWKNLEVGYMQGMCDLAAPLLVVLDNESLVYDCFV
SLMKRMGSNFPNGGAMDSHFANMRSLIQILDGELFEHMHKNGDYTHFYFCYRWFLLDFKR
ELSYDGDVFSVWERIWSANYCSSNNFVLFFALAMLQTYRDIILENDMDFTDIIKFFNEMA
ECHDAEKLIQLAQELVAEVQIMIHK
Nucleotide sequence
Length: 3,367
>KH2012:KH.L147.11.v2.A.SL1-1
CAATTATAGTAAGCAAGTAAGGTAGTTGATTATAAATTTAACCAGATATGTGTTGCATTA
GTATGGGCTGTTAACACGTTAGCTGCGTTTCAACGTTGTTTAAAATGGCAAACGAAACTG
GAAATGTACCAGATGAAGACAAACATGAAAAACTACTTCGGATTCTTAAAAGTCAGGTTA
AAGCCATCATGGAGGAAGCTGTGACGAAGAAGTTTGTTCACGAAGAAAGTCCGCATGTTC
TAAGATTGTGTGGAACTGTGGAAACTTGTTTTCTTGATGGACTAAGGAAACGAACGGCTG
GATTTCTACGATCCAACAAAATCGCTTCCTTGTTCACAAAAGTTGGAAAGGGAGTTCCAC
AAGTTGCAGAACTTGTGACTAAGATTGAAGAAATTGAAACCAATATGAACAAACCCCCGT
CACAAGATGTCTCACTTTCACAAAACAACAACGCACATAACAAGAAACATCTTTGGATAC
GAATTGCCCTCATTTCAAAAATCCTTGATAAAATAGCAGAACATTTGGTTGACCACAGCG
CCAAATATTACGAGTCTTCATCTATAATGGCCAACCCTTTGAGTGGAAGATTGATTTCCG
CAATACTTGTTGGTCCTTGTGCATTGGACTTCACCAAGATGAAAACTCATGATCATTATT
GGTCAGATCCACCAGCTGGTGAACTTATTCAACGACATAAACTTCATAGCAGACACGCCT
CCCCGAGTTCCCCAGGACGACGCCCAGCTCTCCACTTCACTCCAGTGCGTCACCAGTCAT
CTTCCGATTCCATGGAGAAGGGAACCTCGTTCAGGGATTACGTGGAGTCTTTGCATCAGA
ACTCCAAGATGACGCTTTTGTACGGGAAGAATAATGTCATGGTTCAGCCTCAAGAAGACA
TTGGTTTGATACCTGGTTATTTATCTTTGCATCAAGAAGCCAGTTGTATGTTGGTTAAAT
GGACTCCTAACCAACTCATGAATGTGAATCATGATGTGAAATCACGTGAATCATCTCATG
AGGCATCACAAGAAGTACCTGATACAAGTTCATATTGGGAGTTTGCGATATCTGTTGATG
TTCGGGACATCGTGTATCTACATTGCCATCAACAATTAGACAAGAGTGGAACGTTGGTAT
TAGTTGGTCAAGATGGCGTACAATGGCCTCCCATACGTTTCCCCCCCGGTGGTCACTTAT
TATCATTCCTATCGTGTCTTGAAACCGGACTTCTTCCTCACGGACATCTTGATCCTCCGC
TCTGGTCTGAAAAAGGGAAGGGCAAAGTATTTCCTCGATTGCGACGAAAATCTTCAAGAA
AATCGACTTCGAGCACTGAGTCTGACGAACCAACAGATTTTGTATTTCGCGTTAGCACTT
CATCGGATAGCAGTTGTACATGGGATTCTTCAGATGGATATGTTCCTCACCTTGATATGT
ATGTGTATGACAACCAACAACCAAGACATTATAATGTTACAAGCTCAAGGAATGGAACGC
CATCAACCGATATACAGTCCTCACTTAAGGTCTTATGTGACACAATGAGACGACAAATTA
TTTCCCGAGCTTTTTACGGATGGTTAGCTCACTGTCGCCACCTAATGACAGTTCGTACCC
ACTTGTCGGAGATGGTTCATAACCAAGTGATCTCACCCACCTTACCAACTGACGCCACGC
GAGGTGTCAATCAAACTACCTGGAAGGAAATATTCATCTATGGGAAGTTAACAAGCATGA
CTGAGTTGATGCGACACACGTACTTCGGAGGTGTTGATCACGATCTTCGTCCAATAGTTT
GGTTGTTCCTCCTGGAACATTATCCTCCGGACACAGATGAGGAAGATCGGGAGGAAATTG
ATCGGCAGATGGAGGAACAATATCAAGTTATTATGAAACAATGGACTTTTGTGGAAGACA
TAATAAACCAGCGTCAATTAAAATCATCGGAACGAGCGTCTTCATGTTCGACGTCGAGCA
GCGAATCGCCACCCGTGGTTCAACCAATTCTTCGACAACAATCGTCGAATCTTAGCGATG
TTTTCACCAACGATGATCAACAAACTATCAACAAGAAGAATATTGAGAAATACAAAGTGA
TTGACGAGACGAAGATTAGTGAGGGGAAGTCGGTTTCGTTCGAAGATGAACATATTGAGT
CCAGCACATCAAGTCACATTCCATATTCATCTATCAGTTCAACAAGGACTGACCAACATT
CGTCTGTTTCAATGAAAAGTATTAGCACCGATGAAACTGTGCAAGGGGGTGGGGGAGATG
TAGAATTGGAAGGTTCTCCAGAAACAACAAACACAACAGCTGATGATGAAACTACTGATA
AAGAAGTTGATTATACTGTCGAGTTACTGGACACGTTTGCGTTAAACTTACATCGGATCG
ACAAAGACGTTCAACGTTGTGATCGCAACCATCCTTATTTCATGCACGAGGATAACTTGG
TTAAACTACGGAATATAATGTCGTGTTATGTTTGGAAGAACCTGGAAGTTGGATATATGC
AGGGCATGTGTGACTTGGCAGCACCGCTTCTTGTAGTGCTTGATAACGAAAGTTTGGTTT
ACGATTGTTTCGTTTCTCTCATGAAACGAATGGGAAGCAATTTTCCAAACGGTGGCGCTA
TGGATTCACATTTCGCTAATATGAGGTCATTAATACAGATACTCGATGGTGAATTATTTG
AACACATGCATAAGAATGGAGATTACACACATTTCTATTTCTGCTACAGATGGTTTCTAC
TGGATTTTAAAAGAGAGTTATCATATGATGGGGACGTGTTCAGTGTTTGGGAGCGAATAT
GGTCGGCTAACTACTGTTCATCGAATAACTTTGTTTTGTTCTTTGCGCTTGCAATGCTAC
AAACATACAGAGATATTATCCTGGAAAATGATATGGATTTCACGGATATTATTAAATTTT
TTAATGAGATGGCTGAATGTCATGATGCAGAAAAACTCATTCAACTCGCTCAAGAACTAG
TTGCTGAAGTTCAAATAATGATACACAAATAATACCTAACTGTTCCAATATGTTGTACTG
TGGTACTAAAAAAATTAACCTTTTTTTTGTAATTTTTTTATTGTGATTTGTAAATTTGCC
ACACAAGATTACGTTTTGCACAGATTTTGAACCGAATATTTTATTTGCAGTAATTTTGTT
TAAAAATCGAATTTTTAAAATTTCAATTAAAATTTTTTGATTTTTTGAATTTAGATTTTA
TTTTGTCACCTTGCATAGTGCAATACCATACGTGAAGGGAATTTGTTTTTATTTATTTAT
ATTGTAACTGCTGTGAAATATGTTGTGCTGTTGTTTTTGTGGCAGAATAAAATCGTGTTG
CAGTCAT
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[23-187] 2.48E-26 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[49-194] 19.563 |
| Pfam |
Run_dom (IPR004012) - T[57-191] 3.2E-26 |
| SMART |
Run_dom (IPR004012) - T[131-191] 3.1E-10 |
| CDD |
SGSM1/2 (IPR037745) - T[260-437] 2.86322E-77 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[542-605] 6.02E-43 - T[758-877] 6.02E-43 - T[854-976] 3.66E-28 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[563-946] 3.4E-35 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[566-919] 29.77 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[753-942] 5.7E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 53.63 % | 477 | 5.03E-151 |
| SGSM2_HUMAN | 46.033 % | 882 | 0 |
| TBC15_HUMAN | 33.824 % | 130 | 3.9E-31 |