Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L149.21.v1.A.nonSL20-1

Possible name(s)

SPSB1; SPSB2; SPSB4

Gene model

KH2012:KH.L149.21

Location

KhL149 [132,815 / 137,180]

Sequences

Amino acid sequence

Length: 265

>KH.L149.21.v1.A.nonSL20-1
HTYTPPPPPRNGNHLSASGMESECPHRLDVLLDMPAVGVDVQQQHGWNSEDKSVNVFVKD
NDLTVHRHPVAQSTDGVRGKVGYSRGLHCWEVTWNTRQRGTHAMVGVCTSEAALTCMGYR
SLIGQNNESWGWDLGRNKLFHGGKVHRNEKKTYPSYLESDENFVVPEKVLVVLDMDEGTL
SFVADKQYLGVAFTGLKGKTLYPVISCVWGHCEVGIKYINGLEPAPLPMAELCRRRIRMS
MGKKHLHEVEKLPLPHLLQEYVLYR

Nucleotide sequence

Length: 1,414

>KH2012:KH.L149.21.v1.A.nonSL20-1
GAAAATTCCGTTTCGACTAAAAAGCTAGCAGCAAGCCCGGTCGAGCCATAACCGTTCTAA
CCCTTCGACGTGGCGCAGCTTAGACATAAGGAACCAAATAGATTCCACATTTTAGAGTGA
ACTTTTAACTTAGAAACAAAAGGCGCCGGCTATATAAGGGAGCGATCTAAGGACTAAGAC
ATCGAACTTTACCAAGCAACAGTCTTAGAACAATACTGAAAATGGGTCAGAAAATATCAA
GCAGCAGCGAGCGTTCGTCGAGGCAATTCTCATTCATAGAGCCAATCTTAGCACACGTAC
ACACCACCACCACCACCACGCAACGGAAACCATCTCTCGGCATCCGGAATGGAATCTGAA
TGCCCACACAGACTTGACGTCTTATTGGACATGCCAGCAGTCGGTGTAGATGTACAACAA
CAGCACGGCTGGAACTCTGAAGACAAAAGCGTGAACGTTTTCGTAAAGGACAACGACCTA
ACTGTACACAGACATCCTGTCGCACAATCCACTGACGGTGTACGGGGCAAAGTGGGATAC
AGCAGAGGCTTGCATTGCTGGGAGGTAACCTGGAACACCCGCCAACGAGGCACACACGCT
ATGGTTGGGGTATGCACATCAGAAGCCGCTCTAACATGCATGGGGTACCGTTCCCTCATT
GGACAAAATAACGAGTCCTGGGGATGGGACTTGGGACGCAATAAGCTTTTCCATGGCGGT
AAAGTGCACCGCAATGAAAAGAAGACCTACCCCTCGTACCTCGAATCGGACGAGAATTTC
GTCGTTCCTGAAAAAGTTCTGGTTGTTTTAGATATGGATGAAGGAACCTTAAGCTTTGTA
GCTGACAAGCAATACCTTGGCGTGGCGTTCACCGGCCTCAAAGGCAAGACTCTATACCCC
GTTATAAGCTGTGTGTGGGGTCACTGTGAAGTGGGAATCAAGTACATCAATGGCCTTGAA
CCTGCCCCTCTACCAATGGCAGAGCTTTGCCGCCGTCGAATTCGAATGTCGATGGGCAAG
AAACATCTGCACGAGGTCGAAAAACTGCCGTTACCCCATCTGCTGCAAGAATACGTGCTC
TACCGGTGATCACGATCAAACTGCAGCGTTTCGCCAAGCGATGCGTTGGGTTGGTACTAC
GGTGCTAAGACGCGGTTCCGCCGTTGTGCAATATTCTATGGACAAGTGTCTGTTACTTTT
TATAAAAAACCGTACTTTTAACACAGAAAATGTTCGCGCCCACGATTTTATTATTTATTT
TGTCGCACGGTTAAACGGTTATAGGTACGCTATTACATAGCATGCTACTGCGCTGTGTCG
TTCCGTAAGGTTCTTTCGATTTTAATCTTTCCCGTTGTTTTAAATGTATTTTGCCTTCAT
TTTATCACCACAAAATAAAGTAATATGCCACAAA

InterProScan

ProSiteProfiles	B30.2/SPRY (IPR001870) - T[16-225] 13.157
SUPERFAMILY	ConA-like_dom_sf (IPR013320) - T[24-238] 3.09E-59
SMART	SPRY_dom (IPR003877) - T[85-222] 3.9E-20
Pfam	SPRY_dom (IPR003877) - T[88-213] 5.4E-20
Pfam	SOCS_box (IPR001496) - T[226-264] 1.2E-9
SMART	SOCS_box (IPR001496) - T[226-265] 2.0E-11
ProSiteProfiles	SOCS_box (IPR001496) - T[226-265] 12.685

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPSB4_HUMAN	60.887 %	330	5.54E-115
SPSB1_HUMAN	60.241 %	334	1.71E-116
SPSB2_HUMAN	48.76 %	237	3.41E-78