Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L149.21.v2.A.nonSL12-1

Possible name(s)

SPSB1; SPSB2; SPSB4

Gene model

KH2012:KH.L149.21

Location

KhL149 [132,896 / 137,180]

Sequences

Amino acid sequence

Length: 269

>KH.L149.21.v2.A.nonSL12-1
RWSPQTYTPPPPPRNGNHLSASGMESECPHRLDVLLDMPAVGVDVQQQHGWNSEDKSVNV
FVKDNDLTVHRHPVAQSTDGVRGKVGYSRGLHCWEVTWNTRQRGTHAMVGVCTSEAALTC
MGYRSLIGQNNESWGWDLGRNKLFHGGKVHRNEKKTYPSYLESDENFVVPEKVLVVLDMD
EGTLSFVADKQYLGVAFTGLKGKTLYPVISCVWGHCEVGIKYINGLEPAPLPMAELCRRR
IRMSMGKKHLHEVEKLPLPHLLQEYVLYR

Nucleotide sequence

Length: 1,430

>KH2012:KH.L149.21.v2.A.nonSL12-1
AGACATAAGGAACCAAATAGATTCCACATTTTAGAGTGAACTTTTAACTTAGAAACAAAA
GGCGCCGGCTATATAAGGGAGCGATCTAAGGACTAAGACATCGAACTTTACCAAGCAACA
GTCTTAGAACAATACTGAAAATGGGTCAGAAAATATCAAGCAGCAGCGAGCGTTCGTCGA
GGCAATTCTCATTCATAGAGCCAATCTTAGCACGTACAACCAGAACGAGCAGCAACGGCC
GTTCAAATAGAAGCAGTAACTCACCGCCGAAGAATAGCAGAAGACACAGCGTTAAAGATG
GTCACCACAGACGTACACACCACCACCACCACCACGCAACGGAAACCATCTCTCGGCATC
CGGAATGGAATCTGAATGCCCACACAGACTTGACGTCTTATTGGACATGCCAGCAGTCGG
TGTAGATGTACAACAACAGCACGGCTGGAACTCTGAAGACAAAAGCGTGAACGTTTTCGT
AAAGGACAACGACCTAACTGTACACAGACATCCTGTCGCACAATCCACTGACGGTGTACG
GGGCAAAGTGGGATACAGCAGAGGCTTGCATTGCTGGGAGGTAACCTGGAACACCCGCCA
ACGAGGCACACACGCTATGGTTGGGGTATGCACATCAGAAGCCGCTCTAACATGCATGGG
GTACCGTTCCCTCATTGGACAAAATAACGAGTCCTGGGGATGGGACTTGGGACGCAATAA
GCTTTTCCATGGCGGTAAAGTGCACCGCAATGAAAAGAAGACCTACCCCTCGTACCTCGA
ATCGGACGAGAATTTCGTCGTTCCTGAAAAAGTTCTGGTTGTTTTAGATATGGATGAAGG
AACCTTAAGCTTTGTAGCTGACAAGCAATACCTTGGCGTGGCGTTCACCGGCCTCAAAGG
CAAGACTCTATACCCCGTTATAAGCTGTGTGTGGGGTCACTGTGAAGTGGGAATCAAGTA
CATCAATGGCCTTGAACCTGCCCCTCTACCAATGGCAGAGCTTTGCCGCCGTCGAATTCG
AATGTCGATGGGCAAGAAACATCTGCACGAGGTCGAAAAACTGCCGTTACCCCATCTGCT
GCAAGAATACGTGCTCTACCGGTGATCACGATCAAACTGCAGCGTTTCGCCAAGCGATGC
GTTGGGTTGGTACTACGGTGCTAAGACGCGGTTCCGCCGTTGTGCAATATTCTATGGACA
AGTGTCTGTTACTTTTTATAAAAAACCGTACTTTTAACACAGAAAATGTTCGCGCCCACG
ATTTTATTATTTATTTTGTCGCACGGTTAAACGGTTATAGGTACGCTATTACATAGCATG
CTACTGCGCTGTGTCGTTCCGTAAGGTTCTTTCGATTTTAATCTTTCCCGTTGTTTTAAA
TGTATTTTGCCTTCATTTTATCACCACAAAATAAAGTAATATGCCACAAA

InterProScan

ProSiteProfiles	B30.2/SPRY (IPR001870) - T[20-229] 13.157
SUPERFAMILY	ConA-like_dom_sf (IPR013320) - T[28-242] 3.24E-59
SMART	SPRY_dom (IPR003877) - T[89-226] 3.9E-20
Pfam	SPRY_dom (IPR003877) - T[92-217] 5.6E-20
Pfam	SOCS_box (IPR001496) - T[230-268] 1.2E-9
SMART	SOCS_box (IPR001496) - T[230-269] 2.0E-11
ProSiteProfiles	SOCS_box (IPR001496) - T[230-269] 12.685

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPSB4_HUMAN	60.887 %	330	7.94E-115
SPSB1_HUMAN	60.484 %	334	2.74E-116
SPSB2_HUMAN	48.76 %	236	5.75E-78