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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.L152.7.v1....' > 
  5. Transcript 'KH2012:KH.L152.7.v1....'

Transcript Model

Transcript Id

KH2012:KH.L152.7.v1.A.nonSL8-1

Possible name(s)

RPL23A

Gene model

KH2012:KH.L152.7

Location

KhL152 [3,251 / 5,732]

Sequences

Amino acid sequence

Length: 151

>KH.L152.7.v1.A.nonSL8-1
SFHENKMAVGGAKEKALRAKKAVLKGLHSHRKKKFRKSVHFRLPKTLKLPRAPKYPRKSV
AKRNKMDQFAVVKHPLTTESAMKKIEDNNTLVFIVDLKANKPQIKQAVKKLYDIDVAKVN
TLIRPDGRKKAYVKLAPDYDALDVANKIGII

Nucleotide sequence

Length: 487

>KH2012:KH.L152.7.v1.A.nonSL8-1
ATCTTTTCATGAAAACAAGATGGCGGTTGGTGGAGCCAAAGAGAAAGCGTTACGCGCGAA
GAAAGCCGTGTTAAAGGGCCTTCATTCCCATCGTAAAAAGAAATTCCGCAAGAGCGTTCA
CTTCCGGCTCCCAAAGACGCTCAAACTCCCACGAGCTCCAAAATACCCGAGGAAAAGTGT
CGCCAAACGCAACAAGATGGACCAGTTTGCGGTGGTGAAACATCCACTTACGACGGAAAG
TGCGATGAAAAAGATCGAAGACAACAATACATTGGTGTTTATTGTGGATCTTAAGGCCAA
CAAGCCTCAGATCAAACAAGCCGTGAAGAAACTTTACGACATCGACGTCGCGAAGGTGAA
CACACTTATCCGGCCCGATGGAAGGAAGAAGGCGTACGTCAAACTCGCCCCTGACTACGA
CGCACTAGATGTCGCTAATAAGATCGGGATCATCTAAATGTTAATAAAATAAAAACAACA
AATATTG

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[12-61] 1.1E-21
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[33-151] 9.4E-62
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[69-144] 3.2E-29
Pfam
Ribosomal_L25/23 (IPR013025) - T[71-136] 4.7E-17
Hamap
Ribosomal_L25/23 (IPR013025) - T[71-151] 23.157
TIGRFAM
Ribosomal_L23 (IPR019985) - T[75-151] 3.1E-31
ProSitePatterns
Ribosomal_L23/L25_CS (IPR001014) - T[129-144] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 81.746 % 207 6.99E-70