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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA220YP16'
  2. Transcript 'Moocul.CG.ELv1_2.S57...'
  3. Transcript 'KH2012:KH.L152.7.v1....'

Transcript Model

Transcript Id

KH2012:KH.L152.7.v1.A.nonSL9-1

Possible name(s)

RPL23A

Location

KhL152 [3,251 / 5,748]

Sequences

Amino acid sequence

Length: 156

>KH.L152.7.v1.A.nonSL9-1
STLTKSFHENKMAVGGAKEKALRAKKAVLKGLHSHRKKKFRKSVHFRLPKTLKLPRAPKY
PRKSVAKRNKMDQFAVVKHPLTTESAMKKIEDNNTLVFIVDLKANKPQIKQAVKKLYDID
VAKVNTLIRPDGRKKAYVKLAPDYDALDVANKIGII

Nucleotide sequence

Length: 503

>KH2012:KH.L152.7.v1.A.nonSL9-1
AATCCACGCTGACGAAATCTTTTCATGAAAACAAGATGGCGGTTGGTGGAGCCAAAGAGA
AAGCGTTACGCGCGAAGAAAGCCGTGTTAAAGGGCCTTCATTCCCATCGTAAAAAGAAAT
TCCGCAAGAGCGTTCACTTCCGGCTCCCAAAGACGCTCAAACTCCCACGAGCTCCAAAAT
ACCCGAGGAAAAGTGTCGCCAAACGCAACAAGATGGACCAGTTTGCGGTGGTGAAACATC
CACTTACGACGGAAAGTGCGATGAAAAAGATCGAAGACAACAATACATTGGTGTTTATTG
TGGATCTTAAGGCCAACAAGCCTCAGATCAAACAAGCCGTGAAGAAACTTTACGACATCG
ACGTCGCGAAGGTGAACACACTTATCCGGCCCGATGGAAGGAAGAAGGCGTACGTCAAAC
TCGCCCCTGACTACGACGCACTAGATGTCGCTAATAAGATCGGGATCATCTAAATGTTAA
TAAAATAAAAACAACAAATATTG

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[17-66] 1.1E-21
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[38-156] 1.0E-61
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[74-149] 3.49E-29
Hamap
Ribosomal_L25/23 (IPR013025) - T[76-156] 23.157
Pfam
Ribosomal_L25/23 (IPR013025) - T[76-141] 5.0E-17
TIGRFAM
Ribosomal_L23 (IPR019985) - T[80-156] 3.4E-31
ProSitePatterns
Ribosomal_L23/L25_CS (IPR001014) - T[134-149] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 81.746 % 207 5.49E-70