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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L37.39.v1....'
  2. Transcript 'Boleac.CG.SB_v3.S270...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Molecular Tool 'ADMP-MO (Lemaire lab)'
  5. Transcript 'KH2012:KH.L153.100.v...'

Transcript Model

Transcript Id

KH2012:KH.L153.100.v1.A.SL1-1

Possible name(s)

KH.L153.100

Location

KhL153 [256,481 / 258,386]

Sequences

Amino acid sequence

Length: 419

>KH.L153.100.v1.A.SL1-1
TKMEENSALVPLEQQHDIGKNAKASNGKMLLWNDPRLIANQRISNAQPVPISSASLVYYQ
RPNIVEKSQTSFMKCPEKLQPNNVQDVTPVSSDNEVRPLKNYCDICNVGFSTTQSLWRHR
RRKHWKEHKAGMFYTKQKNLVCLLCDDFKCSVQAELIDHYNSAHGKNLDVKCEAFEKEDK
FIEWKADLEKRTSSLFIIKTARKGTHLQNEVKYYSCNRSGYFKRSGNNLRSLKKKGSCKV
SGHCSAYITMKRNKHTGYVTVDYCGEHVGHDLDPKYLKLSPDIRNYVASALSSGVNIDKL
LENLKEEFSMVGRDALISRRDILNIRSKFITESVARGSMYEQIEQQPEEIGEGVREDCTA
DSSKTVDVKNETLQRAQDIIDLIQTTKDPTSLQSMLSCLNYVRDIGHGIQNEIEISENT

Nucleotide sequence

Length: 1,905

>KH2012:KH.L153.100.v1.A.SL1-1
AACCAAAATGGAGGAAAATTCTGCATTAGTGCCTCTAGAACAACAGCATGATATAGGAAA
AAATGCCAAAGCTAGTAATGGGAAAATGTTACTATGGAATGACCCACGTTTAATCGCAAA
CCAACGAATATCAAATGCTCAACCAGTGCCCATATCTTCTGCTAGCTTAGTGTATTACCA
ACGGCCTAATATAGTGGAAAAATCGCAAACAAGTTTCATGAAATGTCCAGAGAAATTACA
GCCTAATAATGTGCAAGACGTTACACCAGTAAGCAGTGATAACGAGGTGCGACCGCTTAA
AAATTACTGCGATATATGTAATGTTGGGTTTAGTACAACTCAATCACTGTGGAGACATAG
GAGAAGAAAGCACTGGAAAGAGCATAAAGCTGGTATGTTTTACACCAAGCAAAAAAACCT
TGTGTGTCTGTTATGTGATGATTTTAAGTGCTCTGTGCAAGCTGAACTAATCGACCATTA
TAATTCGGCTCATGGTAAAAATTTGGATGTAAAATGTGAGGCCTTTGAAAAGGAAGATAA
ATTTATTGAATGGAAAGCGGACCTGGAAAAAAGAACGAGTTCTTTGTTTATTATAAAGAC
AGCGCGAAAAGGGACCCATTTACAAAATGAAGTAAAATATTACTCGTGTAACCGATCCGG
GTATTTTAAAAGGAGTGGGAATAATCTAAGGAGTTTGAAAAAGAAAGGGTCGTGCAAAGT
TTCTGGACACTGTAGCGCGTATATTACTATGAAGAGAAATAAACATACTGGTTATGTCAC
TGTAGATTACTGTGGGGAACATGTAGGTCACGATTTGGACCCCAAATATTTGAAATTATC
TCCGGATATTCGGAATTATGTAGCAAGCGCGCTTTCAAGCGGGGTTAACATTGATAAACT
TTTGGAGAATTTAAAAGAAGAATTTTCGATGGTGGGAAGAGACGCTCTGATTTCAAGACG
AGATATTTTGAACATTAGAAGCAAATTTATCACTGAATCTGTCGCGAGAGGGAGTATGTA
TGAGCAAATTGAACAGCAGCCTGAAGAAATTGGGGAGGGTGTGCGGGAAGATTGCACAGC
GGATAGCAGCAAAACTGTTGATGTTAAAAATGAAACTTTGCAAAGGGCTCAGGATATTAT
AGATTTGATTCAGACTACGAAAGACCCAACTTCTTTGCAGTCTATGTTGAGCTGTCTAAA
CTATGTAAGAGACATTGGGCATGGGATACAAAATGAAATTGAAATATCTGAGAATACATA
GCATGGAGATATACAACTGTTAGAATTTAAATTGTGCAACTTTGATGGCAGTACTGCATA
TAGTACTGTGGGGGAAAGACGGGAAACCTTTAGCACATAATATCCAAATATTCTGATTGT
GTTTTATACAATTAACAACAGTCTATGGGAGTCGTGGGGATACAGTTTTATAATTCTATA
AATATTCTTTGTTTAATACCAAATGGGACAAGAAAACGATATGAAAAGGTGTCCCATCCT
TCCCCACCCTACTATAATATGATTGAAGTTTGCTTAGGTAAGCGTTTAAAATAAACTGTT
ATATCACAAAGCTATTTCCATTCATTTTTTCTTGTAAGCAATGTTTGGCACATATGTGTT
ATTATAATATGATTGAAGCTTTCTTGGTTACGTATTACAAATAAGTTGTTGGATCACAAA
GCCATCTCCATTTGGATTTTCTTGTGGGGTTTATAGCCTTCTAAAACTAAATCCTCCATT
GTGATTTCATCTATTGAGTTGACATCTCTTTTAAACTTTAGCGTTGGAAAGGGCCTTGGT
TCACGCTTTAATTGTTCTTTTAACGGCTCAATATGATTGAGGTACACATGAGCATCACCT
AGTGTGTGGACAAAGTCGCCTGGTTTCAATCCTGCCATAAAAATC

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[101-124] 0.29 - T[140-164] 14.0
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[101-129] 9.162
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[103-124] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value