- Region 'REG00001280' >
- Transcript 'KH2012:KH.C2.526.v2....' >
- Transcript 'KH2012:KH.L153.45.v1...'
Transcript Model
Transcript Id
KH2012:KH.L153.45.v1.A.SL3-1
Possible name(s)
CCT4; CCT8; CCT8L2
Gene model
Location
KhL153 [314,232 / 322,150]
Amino acid sequence
Length: 564
>KH.L153.45.v1.A.SL3-1
IFKLGNTVSFKYSLKMAFRVPKAPGFAQMLKDGAKNFQGLEEAVYRNIKACKELSKTTQS
AFGPHGMNKMVINHIEKLFVTNDAATILKELEVQHPAAKMVVIASQMCEQEVGDGTNFVL
IFAGAMLALAEELLRMGLSVPEVTEGFEAACDKAVEILPDLVCNTVPDLRDLNVVTKALK
TSLASKQYGNEDFLSKLIAEACVGILPPNRIQFNVDNIRVIKLLGSGVHSSQLVNGMMFL
RECESDLKNIKGAKVAVYTCPFDMLNTETKGTVLLKNAQELLNFSTGEENILDAQVKAIV
DTGINVIVSGGKVSDLALHFANKHKIMVVRLNSKWDLRRLCKTINATALPRLTPPTPEEA
GHCSIVRQDEIGDRSVVIFEHSSKEDTKICSLALRAATENILDDLERAVDDGVNNFKVIT
RDQRQVPGAGACEIELAKRIAKFGESCPGLEQYAIKKFAQALEVVPRALAENAGLNPTQV
VSKLYASHQEDNGSNKGVDIETGDVIDAAEEGILDQYLTKHWAIRLATNAVVTVLSVDQI
IMAKAAGGPKPPKQGGDWDKDDDE
Nucleotide sequence
Length: 2,039
>KH2012:KH.L153.45.v1.A.SL3-1
TTTGTGTTAAATATTTAAGTTAGGTAATACTGTGTCTTTTAAATATTCCCTAAAAATGGC
GTTCCGAGTTCCCAAAGCACCAGGTTTTGCCCAAATGTTAAAAGACGGCGCAAAGAACTT
TCAAGGCCTTGAAGAAGCTGTGTATCGTAACATCAAAGCTTGCAAAGAGCTTTCAAAAAC
CACTCAGTCAGCATTTGGACCCCATGGAATGAATAAGATGGTTATCAACCACATTGAAAA
ACTCTTTGTAACAAATGATGCTGCTACTATACTGAAAGAATTGGAGGTTCAACACCCAGC
AGCCAAGATGGTGGTCATTGCCTCACAAATGTGTGAACAAGAAGTAGGAGATGGAACAAA
CTTTGTCCTCATTTTCGCAGGAGCAATGTTAGCACTTGCAGAAGAACTTCTTAGGATGGG
ACTTTCTGTGCCAGAGGTTACTGAAGGTTTTGAGGCAGCTTGTGATAAAGCTGTGGAGAT
TTTACCAGACCTGGTTTGCAACACTGTGCCAGACCTTCGAGATCTTAATGTTGTAACTAA
AGCATTGAAAACATCACTGGCAAGCAAACAGTATGGAAACGAAGATTTTCTTTCAAAGTT
AATTGCTGAAGCTTGTGTTGGAATACTGCCACCAAATCGCATCCAGTTCAACGTAGATAA
CATTCGTGTGATCAAACTACTCGGATCTGGAGTTCATTCGTCACAACTTGTCAACGGAAT
GATGTTTTTAAGAGAATGTGAAAGCGACTTAAAGAATATTAAAGGCGCAAAAGTAGCGGT
ATACACTTGTCCTTTTGATATGCTTAATACTGAAACTAAAGGCACAGTATTGCTGAAGAA
TGCACAGGAATTGCTCAACTTTAGCACGGGAGAAGAAAACATTCTGGATGCTCAAGTTAA
AGCCATCGTGGATACTGGTATTAATGTGATCGTGTCTGGTGGAAAAGTCTCTGATCTAGC
TCTACATTTCGCCAACAAACACAAGATTATGGTGGTTAGACTTAACTCAAAGTGGGACCT
CAGGAGACTTTGTAAAACTATCAATGCTACTGCTTTGCCGAGACTGACGCCACCTACACC
AGAAGAGGCAGGTCACTGCAGTATCGTACGTCAAGACGAGATTGGTGACCGTAGTGTGGT
CATTTTCGAGCATTCATCAAAAGAAGACACTAAAATATGCTCTCTGGCGCTCCGTGCGGC
CACTGAGAATATTCTAGATGACCTGGAAAGGGCAGTAGATGACGGAGTCAATAATTTCAA
AGTCATTACAAGGGACCAGAGACAGGTTCCTGGAGCAGGAGCTTGCGAGATAGAACTCGC
GAAAAGAATTGCAAAGTTTGGGGAATCCTGTCCGGGGTTGGAGCAATATGCGATTAAAAA
GTTTGCGCAAGCATTAGAGGTGGTACCTCGCGCTCTCGCTGAAAATGCTGGCTTGAATCC
TACTCAAGTAGTCTCTAAGTTGTATGCAAGTCATCAGGAGGATAATGGATCAAACAAAGG
AGTTGACATCGAAACAGGCGACGTTATCGACGCAGCAGAAGAGGGAATTCTCGACCAGTA
CCTGACCAAGCATTGGGCTATAAGGCTGGCCACTAATGCAGTGGTGACCGTTCTCAGTGT
TGACCAGATAATTATGGCAAAAGCAGCTGGCGGGCCCAAGCCACCAAAACAGGGCGGAGA
TTGGGATAAAGATGACGACGAATAGATTGTGACGTCATAGGGTGATGACGTCATTAAAAT
TTGGCGTTGTTACTTTATACTCGTGGTATTTTGCCGTTGATTGATTTGATGACGTTTTTC
GTGACGTCGTTGCTTCATGACGTCATTGTCGTGACGTCATTAGACTTTGTTCCCCATATA
CTTGTAGCATGGCGTTGAGCATGTTTGATTTTGTGTTTTGTACGCGTCCATTTAATATTT
GCGCGTTTCTATTAGACAGAAAATTCAAGTTTTGATAAAAATTTCGTCGCAAAAGTGAAT
TAAATGCGATTTCAATGTTTAATACCAAGTTTCACTTGGTTTGCAAGTTTCGCACCACA
| TIGRFAM |
Chap_CCT_theta (IPR012721) - T[25-554] 7.3E-233 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[25-556] 1.4E-256 |
| CDD |
Chap_CCT_theta (IPR012721) - T[35-544] 0.0 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[36-165] 6.02E-78 - T[423-543] 6.02E-78 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[47-165] 1.0E-160 - T[424-541] 1.0E-160 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[54-544] 4.4E-152 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[56-72] 1.5E-20 - T[78-96] 1.5E-20 - T[108-127] 1.5E-20 - T[391-413] 1.5E-20 - T[425-437] 1.5E-20 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[80-96] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[168-234] 1.0E-160 - T[388-423] 1.0E-160 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[171-236] 5.19E-20 - T[389-423] 5.19E-20 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[231-395] 3.4E-38 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[235-263] 1.0E-160 - T[286-387] 1.0E-160 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPQ_HUMAN | 68.421 % | 744 | 0 |
| TCPQM_HUMAN | 31.335 % | 237 | 7.12E-71 |
| TCPQL_HUMAN | 30.829 % | 234 | 1.06E-69 |