Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L154.2.v1.A.ND2-1

Possible name(s)

PTGR1; PTGR2; ZADH2

Gene model

KH2012:KH.L154.2

Location

KhL154 [121,310 / 126,267]

Sequences

Amino acid sequence

Length: 327

>KH.L154.2.v1.A.ND2-1
NCKMVHSKYLAKTREFDGMPKLNDFEIIEEEIDETLKDGEVIGEAICTSVDPFIRAYPIP
PGVAVPGLQVLRVTKSANSKYPVGCKVMGNCGWRTTCKISDDIIWYKVEGDLSDTVWLGA
LGMPGISAYCGFLDICSPKPGETVMVNACSGAVGSIVGQIAKIKGCKVIGCCGSDAKIEF
SKSIGFDEVFNYKTCGSYTEVLKKLAPNGIDCFFDNVGGQLSSDIMSCMNMGGRIAVCGA
ITAYNSKEPVTATVVQPDVVLKQLSIKGFLIYHLKHRFSDALKEMVPWVSEGKIKTRETV
TTGFENIPRSFIDMLGGKNIGKAVVVL

Nucleotide sequence

Length: 1,630

>KH2012:KH.L154.2.v1.A.ND2-1
GTTTAAGTCGTTTTGATGAAATAGTAACAACCGTAAAATGTTCTCAGAAATAGTTCAACA
ATCAGCATAGTTTTCTGCAATTTTAAGTAAAGACCGCACCTTAAATTGAAATTGCAAGAT
GGTTCACTCAAAATATTTGGCAAAAACTCGGGAGTTTGATGGGATGCCAAAACTGAATGA
TTTCGAAATAATTGAAGAAGAAATTGATGAAACTTTAAAAGATGGAGAGGTGATTGGCGA
AGCGATTTGCACGAGCGTTGACCCGTTTATTAGGGCATACCCGATTCCACCCGGCGTTGC
AGTGCCTGGTTTACAAGTTTTAAGAGTTACCAAGAGCGCAAACAGCAAGTACCCTGTCGG
CTGTAAAGTCATGGGCAACTGCGGATGGCGCACAACATGCAAAATTTCGGATGATATTAT
ATGGTATAAAGTCGAAGGTGACCTCAGTGATACTGTATGGCTGGGTGCTCTCGGAATGCC
AGGAATTTCAGCGTATTGTGGATTCCTTGACATTTGTTCGCCCAAACCAGGCGAGACTGT
AATGGTGAACGCCTGTTCTGGAGCTGTTGGTAGCATAGTGGGACAAATTGCTAAGATTAA
GGGCTGCAAAGTAATTGGTTGCTGCGGTAGCGATGCAAAAATTGAATTTTCGAAGTCGAT
TGGATTTGACGAAGTATTCAATTATAAGACATGTGGGTCTTACACTGAGGTTCTAAAGAA
GCTTGCTCCAAATGGAATTGATTGTTTCTTTGATAACGTTGGTGGTCAGTTATCGTCGGA
TATCATGAGTTGTATGAACATGGGCGGAAGAATAGCTGTATGCGGTGCAATTACTGCATA
CAACTCCAAAGAACCAGTTACAGCAACTGTGGTTCAACCTGACGTGGTCCTTAAACAACT
GAGCATAAAAGGATTCCTTATCTATCATTTAAAACATAGGTTTTCGGACGCTTTGAAGGA
AATGGTTCCGTGGGTTTCAGAGGGCAAAATTAAAACCCGTGAAACGGTCACTACTGGTTT
TGAAAATATTCCCCGTTCGTTCATTGATATGCTGGGAGGGAAAAACATCGGCAAAGCTGT
CGTCGTACTTTGAATAATGATGTGCGTTGTGTAGGAAAAGCATAATGTTAATTTTTTTGC
ACTAATCTGCCGGTATTCACTTTTGACAACAGAAACCATTAACTTGTATGTATATATAGT
AGGGTGGGGTAAGATGGGACACCTTTTTATTCAATTTTCGCGTTCCGTTTAGTAGTAAAC
AAAAAAAAACATTCAATGAATTATAAAAACCGTTTCTTTACGACTTTTATAGATCGTTGT
TATTTGTTTAAAACGGGATCGGATGTTTTGATATTATGTACTAAAGGTGTCCGGTCTTAC
CACCCTATTATACTATTATGCGGAAATTCATCGTTAGCACATAAACGTTCCCTAACAAAC
CTTACACGGTGACATTAATCATTATATCCAGCATGCATTTTGTAAAGTAGGCTATGTAAT
TTAAAACCTTTAACGTAATCATTTAGTAGCATCATGTTTGTACCTAACCTATTTAGTGAA
CCATTTCACTTGACTTGTTTTAAAATGACGGTTACTTGAAAATGAAATACACTACTAAAT
ACCTTTTGTT

InterProScan

SUPERFAMILY	GroES-like_sf (IPR011032) - T[4-135] 1.88E-20 - T[281-325] 2.5E-5
CDD	PTGR1 (IPR014190) - T[5-325] 1.00938E-158
SMART	PKS_ER (IPR020843) - T[21-325] 8.0E-6
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[116-293] 4.37E-46
Pfam	ADH_C (IPR013149) - T[152-285] 1.8E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PTGR3_HUMAN	32.243 %	103	5.87E-25
PTGR1_HUMAN	44.985 %	273	1.95E-90
PTGR2_HUMAN	30.816 %	148	7.98E-42