- EST 'ma321h01' >
- Clone 'cima827281' >
- Transcript 'KH2012:KH.L154.31.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.31.v1.A.SL4-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [181,561 / 183,530]
Amino acid sequence
Length: 384
>KH.L154.31.v1.A.SL4-1
INVSMNNDVAALVVDNGSGMCRAGFAGDDAPRAVFPTIVGRPHRQGVVVDKGYKDTYFGD
EAQSKRDSLFLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAVEEHPVFFTEAPLNPKINR
EKMTQIMFETFNTSAMYVAIQAELSLYASGRTTGIVFGSGDGVSHTVPIYEGYALPHATR
RLDLAGRDLTGYLMGILTEIGYYFTTTAEREIVRDIKEKLCYVALDFEKEMQIAASSSSL
ENSYELPDGQVITIGNERFRCPEALFQPALLGMEYAGIHETTYNSIMKCDVDIRKDLYAN
TVLSGGSTMFPAIVDRMQKEITGLAPPTMKIKIIAPPEREYSVWIGGSILASLSTFQQMW
ISKQEYDESGSSIVYRKCFSMQYS
Nucleotide sequence
Length: 1,478
>KH2012:KH.L154.31.v1.A.SL4-1
TATCAACGTTAGCATGAACAATGATGTTGCTGCACTCGTAGTCGACAATGGATCCGGTAT
GTGCAGGGCCGGTTTCGCCGGAGACGACGCACCACGTGCCGTCTTCCCAACCATCGTAGG
ACGACCCCATCGCCAGGGCGTCGTAGTTGATAAGGGATACAAAGACACTTACTTCGGAGA
CGAAGCCCAGAGCAAAAGAGATAGCCTTTTTTTAAAATACCCAATTGAGCACGGTATCGT
AACCAACTGGGACGACATGGAAAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGT
CGCAGTAGAAGAGCACCCAGTTTTCTTTACTGAGGCCCCACTTAACCCAAAAATTAACCG
TGAAAAGATGACCCAAATTATGTTCGAAACCTTTAACACCTCCGCTATGTACGTCGCCAT
CCAGGCTGAGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATCGTGTTCGGCAGTGG
TGATGGTGTTTCCCACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCCACCCG
TCGTCTCGATTTGGCCGGACGAGATCTTACCGGTTATTTAATGGGGATCTTGACCGAGAT
AGGTTATTACTTCACCACAACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAAAAACT
TTGCTATGTTGCTCTTGACTTCGAGAAAGAAATGCAAATCGCTGCCAGCAGCAGCTCACT
CGAAAATAGCTACGAACTTCCTGACGGACAGGTTATTACCATTGGCAATGAGCGATTCCG
TTGCCCAGAGGCCCTCTTCCAACCAGCCCTCCTTGGTATGGAATATGCTGGTATCCACGA
GACCACCTACAACTCCATTATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAA
CACAGTTCTCTCTGGAGGTTCCACTATGTTCCCTGCAATCGTCGACAGAATGCAAAAGGA
GATTACTGGTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGGA
ATACTCTGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTG
GATCAGCAAACAAGAATACGACGAGTCTGGCTCTTCTATTGTCTACCGCAAATGCTTCTC
AATGCAATATTCGTAACCTTCAAAACTATATTATATCGATTAGCTGTTGTATAAAAACGT
TATCTAATATTTGCACTTGGTCTTCAAAATTCATGATCTTGCTCCAGTATTGAATTCTTC
GTGTGAATTACCCTGACACAGCAATGCCACCGTAAACATGGTGTGTTTGATACAACTGAT
ATTATGTGAATACTTACACTCTGTAGACCTTTATATTATTTTAAGCTGTGAAATGAATGC
GTTTTGTCGAAAACTTATTTGACGAACTAAACGGATCATAGGCTTTATTCAACTTAAAAC
GAACGTCTCAATAAAACACAATAGTAAAACTAATACAA
| PANTHER |
Actin (IPR004000) - T[3-378] 2.7E-240 |
| Pfam |
Actin (IPR004000) - T[8-379] 3.9E-137 |
| SMART |
Actin (IPR004000) - T[9-379] 6.9E-213 |
| PRINTS |
Actin (IPR004000) - T[30-39] 1.3E-50 - T[53-64] 1.3E-50 - T[65-87] 1.3E-50 - T[119-132] 1.3E-50 - T[144-163] 1.3E-50 - T[240-256] 1.3E-50 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[360-368] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 86.4 % | 679 | 0 |
| ACTB_HUMAN | 86.933 % | 683 | 0 |
| ACTA_HUMAN | 84.14 % | 660 | 0 |