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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'KH2012:KH.L154.34.v1...'

Transcript Model

Transcript Id

KH2012:KH.L154.34.v1.A.SL1-1

Possible name(s)

ACTA2; ACTB; ACTG1

Location

KhL154 [193,739 / 195,382]

Sequences

Amino acid sequence

Length: 305

>KH.L154.34.v1.A.SL1-1
INMDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQANREKMTQIMFETFNTP
AMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLM
KILTERGYAFTTTAEREIVRDMKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI
GNERFRCPEALFQPSFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA
DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV
HRKCF

Nucleotide sequence

Length: 1,066

>KH2012:KH.L154.34.v1.A.SL1-1
ATACTTAGTTTAAACAAAAACTTTAAAAAAATCATAAATAAATTAATATGGACGAGGATG
TTGCCGCACTCGTAGTCGACAATGGATCCGGTATGTGCAAGGCCGGTTTCGCCGGAGACG
ACGCACCACGTGCCGTCTTCCCATCCATTGTAGGACGACCCCGTCACCAGGCTAACCGTG
AAAAGATGACCCAAATCATGTTCGAAACTTTCAACACCCCTGCCATGTACGTCGCCATTC
AGGCTGTGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATCGTGTTCGACAGTGGTG
ATGGTGTTTCCCACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCATGCCATCCTTC
GTCTCGATTTGGCCGGACGAGATCTTACCGATTTCTTAATGAAGATCTTGACCGAGAGAG
GTTATGCCTTCACCACCACTGCCGAGCGTGAAATCGTTCGTGATATGAAGGAAAAACTTT
GCTATGTTGCTCTTGACTTCGAGCAAGAAATGCAAACCGCTGCCAGCAGCAGCTCACTTG
AGAAGAGCTACGAACTTCCTGACGGACAGGTCATTACCATTGGAAACGAACGATTCCGTT
GCCCAGAGGCCCTCTTCCAACCATCCTTCCTTGGTATGGAATCTGTTGGTATCCACGAGA
CCACCTACAATTCCATCATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAACA
CCGTTCTGTCTGGAGGTTCCACTATGTTCCCTGGAATCGCCGACAGAATGCAAAAGGAAA
TCACTGCTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGAAAT
ACTCCGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGA
TCAGCAAACAAGAATACGACGAGTCCGGCCCATCCATTGTCCACCGAAAGTGTTTTTAAA
GTGCTCCAATAAACATTTATGTCATACCATTATTTCCTTTGTGCATTTTAGTTTAATATA
TTCAAATGAATTTATACTCAGATACAAAGACACAAATAAAACATTA

InterProScan

PANTHER
Actin (IPR004000) - T[2-43] 3.5E-209 - T[43-304] 3.5E-209
SMART
Actin (IPR004000) - T[7-305] 8.3E-157
Pfam
Actin (IPR004000) - T[43-305] 6.2E-104
ProSitePatterns
Actin_CS (IPR004001) - T[286-294] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 95.437 % 526 0
ACTB_HUMAN 95.437 % 526 0
ACTC_HUMAN 92.015 % 514 0