- Transcript 'KH2012:KH.L154.4.v1....' >
- Transcript 'KH2012:KH.L154.4.v1....'
Transcript Model
Transcript Id
KH2012:KH.L154.4.v1.A.nonSL5-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [170,673 / 172,734]
Amino acid sequence
Length: 377
>KH.L154.4.v1.A.nonSL5-1
INMDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEK
SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV
LSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,641
>KH2012:KH.L154.4.v1.A.nonSL5-1
AGGTACAATAAAAGCATTCAGCTTCATTTAAATTTTTGAATTTTAATCTACACAAACAAT
AAATCAACATGGATGATGATGTTGCCGCACTCGTAGTCGACAATGGATCCGGTATGTGCA
AGGCCGGTTTCGCCGGAGACGACGCACCACGTGCCGTTTTCCCATCCATCGTAGGACGAC
CCCGTCACCAGGGCGTCATGGTTGGTATGGGACAAAAAGACAGCTACGTCGGAGACGAAG
CCCAGAGCAAGAGAGGTATCCTTACTCTGAAATACCCAATTGAGCACGGTATCGTCACCA
ACTGGGACGACATGGAAAAAATCTGGCATCACACTTTCTACAACGAACTCCGTGTCGCAC
CAGAAGAGCACCCAGTTCTCCTTACTGAGGCCCCACTTAACCCAAAAGCTAACCGTGAAA
AGATGACCCAAATCATGTTCGAAACCTTCAACACCCCCGCCATGTACGTCGCCATCCAGG
CTGTGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATTGTGTTCGACAGTGGTGATG
GTGTTTCCCACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCCATCCTTCGTC
TCGATTTGGCTGGACGAGATCTTACCGATTACTTGATGAAGATCTTGACCGAGAGAGGTT
ATTCCTTCACCACCACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAAAAACTTTGCT
ATGTTGCTCTTGACTTCGAGCAAGAAATGCAAACCGCCGCCAGCAGCAGCTCACTCGAGA
AGAGCTACGAACTTCCTGACGGACAGGTTATCACCGTCGGAAACGAGCGATTCCGTTGCC
CAGAGGCCCTCTTCCAACCATCCTTCCTTGGTATGGAATCTGCTGGTATCCACGAGACCA
CCTACAACTCCATCATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAACACCG
TTCTCTCTGGAGGTTCCACTATGTTCCCTGGAATCGCCGACAGAATGCAAAAGGAAATCA
CTGCTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGAAATACT
CCGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCA
GCAAACAAGAATACGACGAGTCCGGCCCATCCATTGTCCACCGCAAATGCTTCTAAATGC
AATAATCATAACCTTAGCCGAACTTTTAAAACTATTATATCGATTTGTTGTTGTGTAAAA
ACGTTTACATATATTTGGGTTTATTTTTGTTCGAAGTACGTTGCGCCGGGCCAATCGAGG
CTGCGTGTTACTTAACATCATACATTCCTAAACCGGCTTCAGCTGCTAAGTAACTGCACT
GTGCACAATGCAGTGCTTATCATTCCAATTCAATAAAGGACCAATACATCGGACATATTG
TTTATAACCGCGTACCTTGTTCTTTTGTTGTAATCAACACTGTTCGAATAATTTACGAAG
TAACAATAAAAATACTCGGAATACCCACACCAAAATTTGCATGGTCTGTCTCCATACAGT
ACTTATTGTAACATATATCGACTACATGGTGACTTAACAATGTTAAAGCGCAGTGTTGGA
AAAATACAATTCCATTTCCGA
| PANTHER |
Actin (IPR004000) - T[2-376] 2.1E-273 |
| Pfam |
Actin (IPR004000) - T[5-377] 1.9E-151 |
| SMART |
Actin (IPR004000) - T[7-377] 1.1E-242 |
| PRINTS |
Actin (IPR004000) - T[28-37] 1.9E-57 - T[51-62] 1.9E-57 - T[63-85] 1.9E-57 - T[117-130] 1.9E-57 - T[142-161] 1.9E-57 - T[238-254] 1.9E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[55-65] . - T[358-366] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[106-118] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 96.267 % | 764 | 0 |
| ACTB_HUMAN | 97.333 % | 769 | 0 |
| ACTA_HUMAN | 93.048 % | 743 | 0 |