- Transcript 'KH2012:KH.L154.4.v2....'
Transcript Model
Transcript Id
KH2012:KH.L154.4.v2.R.ND3-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [170,673 / 172,468]
Amino acid sequence
Length: 334
>KH.L154.4.v2.R.ND3-1
GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSH
TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
DFEQEMQTAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNS
IMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWI
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,450
>KH2012:KH.L154.4.v2.R.ND3-1
GGCGTCATGGTTGGTATGGGACAAAAAGACAGCTACGTCGGAGACGAAGCCCAGAGCAAG
AGAGGTATCCTTACTCTGAAATACCCAATTGAGCACGGTATCGTCACCAACTGGGACGAC
ATGGAAAAAATCTGGCATCACACTTTCTACAACGAACTCCGTGTCGCACCAGAAGAGCAC
CCAGTTCTCCTTACTGAGGCCCCACTTAACCCAAAAGCTAACCGTGAAAAGATGACCCAA
ATCATGTTCGAAACCTTCAACACCCCCGCCATGTACGTCGCCATCCAGGCTGTGCTTTCA
TTGTACGCTTCTGGTCGTACCACCGGTATTGTGTTCGACAGTGGTGATGGTGTTTCCCAC
ACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCCATCCTTCGTCTCGATTTGGCT
GGACGAGATCTTACCGATTACTTGATGAAGATCTTGACCGAGAGAGGTTATTCCTTCACC
ACCACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAAAAACTTTGCTATGTTGCTCTT
GACTTCGAGCAAGAAATGCAAACCGCCGCCAGCAGCAGCTCACTCGAGAAGAGCTACGAA
CTTCCTGACGGACAGGTTATCACCGTCGGAAACGAGCGATTCCGTTGCCCAGAGGCCCTC
TTCCAACCATCCTTCCTTGGTATGGAATCTGCTGGTATCCACGAGACCACCTACAACTCC
ATCATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAACACCGTTCTCTCTGGA
GGTTCCACTATGTTCCCTGGAATCGCCGACAGAATGCAAAAGGAAATCACTGCTCTTGCA
CCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGAAATACTCCGTCTGGATT
GGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCAGCAAACAAGAA
TACGACGAGTCCGGCCCATCCATTGTCCACCGCAAATGCTTCTAAATGCAATAATCATAA
CCTTAGCCGAACTTTTAAAACTATTATATCGATTTGTTGTTGTGTAAAAACGTTTACATA
TATTTGGGTTTATTTTTGTTCGAAGTACGTTGCGCCGGGCCAATCGAGGCTGCGTGTTAC
TTAACATCATACATTCCTAAACCGGCTTCAGCTGCTAAGTAACTGCACTGTGCACAATGC
AGTGCTTATCATTCCAATTCAATAAAGGACCAATACATCGGACATATTGTTTATAACCGC
GTACCTTGTTCTTTTGTTGTAATCAACACTGTTCGAATAATTTACGAAGTAACAATAAAA
ATACTCGGAATACCCACACCAAAATTTGCATGGTCTGTCTCCATACAGTACTTATTGTAA
CATATATCGACTACATGGTGACTTAACAATGTTAAAGCGCAGTGTTGGAAAAATACAATT
CCATTTCCGA
| SMART |
Actin (IPR004000) - T[1-334] 1.5E-199 |
| PANTHER |
Actin (IPR004000) - T[1-333] 9.1E-241 |
| PRINTS |
Actin (IPR004000) - T[8-19] 7.6E-51 - T[20-42] 7.6E-51 - T[74-87] 7.6E-51 - T[99-118] 7.6E-51 - T[195-211] 7.6E-51 |
| Pfam |
Actin (IPR004000) - T[9-334] 2.4E-133 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[12-22] . - T[315-323] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[63-75] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 97.305 % | 683 | 0 |
| ACTB_HUMAN | 97.305 % | 683 | 0 |
| ACTC_HUMAN | 94.311 % | 669 | 0 |