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TRANSCRIPT CARD

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  1. Clone 'cilv006n15' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...' > 
  3. Transcript 'KH2012:KH.L154.4.v3....'

Transcript Model

Transcript Id

KH2012:KH.L154.4.v3.A.SL8-1

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

KH2012:KH.L154.4

Location

KhL154 [170,673 / 172,720]

Sequences

Amino acid sequence

Length: 305

>KH.L154.4.v3.A.SL8-1
INMDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQANREKMTQIMFETFNTP
AMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITV
GNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA
DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV
HRKCF

Nucleotide sequence

Length: 1,411

>KH2012:KH.L154.4.v3.A.SL8-1
CATTCAGCTTCATTTAAATTTTTGAATTTTAATCTACACAAACAATAAATCAACATGGAT
GATGATGTTGCCGCACTCGTAGTCGACAATGGATCCGGTATGTGCAAGGCCGGTTTCGCC
GGAGACGACGCACCACGTGCCGTTTTCCCATCCATCGTAGGACGACCCCGTCACCAGGCT
AACCGTGAAAAGATGACCCAAATCATGTTCGAAACCTTCAACACCCCCGCCATGTACGTC
GCCATCCAGGCTGTGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATTGTGTTCGAC
AGTGGTGATGGTGTTTCCCACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCC
ATCCTTCGTCTCGATTTGGCTGGACGAGATCTTACCGATTACTTGATGAAGATCTTGACC
GAGAGAGGTTATTCCTTCACCACCACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAA
AAACTTTGCTATGTTGCTCTTGACTTCGAGCAAGAAATGCAAACCGCCGCCAGCAGCAGC
TCACTCGAGAAGAGCTACGAACTTCCTGACGGACAGGTTATCACCGTCGGAAACGAGCGA
TTCCGTTGCCCAGAGGCCCTCTTCCAACCATCCTTCCTTGGTATGGAATCTGCTGGTATC
CACGAGACCACCTACAACTCCATCATGAAGTGCGATGTTGACATCCGTAAGGACTTGTAC
GCCAACACCGTTCTCTCTGGAGGTTCCACTATGTTCCCTGGAATCGCCGACAGAATGCAA
AAGGAAATCACTGCTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAG
AGGAAATACTCCGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAG
ATGTGGATCAGCAAACAAGAATACGACGAGTCCGGCCCATCCATTGTCCACCGCAAATGC
TTCTAAATGCAATAATCATAACCTTAGCCGAACTTTTAAAACTATTATATCGATTTGTTG
TTGTGTAAAAACGTTTACATATATTTGGGTTTATTTTTGTTCGAAGTACGTTGCGCCGGG
CCAATCGAGGCTGCGTGTTACTTAACATCATACATTCCTAAACCGGCTTCAGCTGCTAAG
TAACTGCACTGTGCACAATGCAGTGCTTATCATTCCAATTCAATAAAGGACCAATACATC
GGACATATTGTTTATAACCGCGTACCTTGTTCTTTTGTTGTAATCAACACTGTTCGAATA
ATTTACGAAGTAACAATAAAAATACTCGGAATACCCACACCAAAATTTGCATGGTCTGTC
TCCATACAGTACTTATTGTAACATATATCGACTACATGGTGACTTAACAATGTTAAAGCG
CAGTGTTGGAAAAATACAATTCCATTTCCGA

InterProScan

PANTHER
Actin (IPR004000) - T[2-43] 1.5E-210 - T[43-304] 1.5E-210
SMART
Actin (IPR004000) - T[7-305] 3.5E-158
Pfam
Actin (IPR004000) - T[43-305] 1.8E-105
ProSitePatterns
Actin_CS (IPR004001) - T[286-294] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 96.198 % 529 0
ACTB_HUMAN 96.198 % 529 0
ACTC_HUMAN 93.156 % 518 0