- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L154.40.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.40.v1.A.ND1-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [188,518 / 190,037]
Amino acid sequence
Length: 284
>KH.L154.40.v1.A.ND1-1
NMNNDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQHSYVGDEAQSKRGVLTLK
YPIEHGIVTNWDDIEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKDNRKKMTQMMFETFN
TPAMYVAIQALLSLYGAGRITGVVCGSGDGVSHTVPIYEAESEIVRELKEKICYVALDFE
QEMQKVTNSHSLEKWHELPDGQVRFIYNANNSIMKCDVDIRKNLYANVVLSGGSTIKIIA
PAERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 859
>KH2012:KH.L154.40.v1.A.ND1-1
TAACATGAACAATGATGTTGCCGCACTCGTAATCGACAATGGATCCGGTATGTGCAAGGC
CGGTTTCGCCGGAGACGACGCACCACGTGCCGTCTTCCCATCCATCGTAGGACGACCCCG
TCACCAGCACAGCTACGTCGGAGACGAAGCTCAAAGCAAGAGAGGTGTCCTAACTCTGAA
ATACCCAATTGAGCACGGTATCGTCACCAACTGGGACGACATAGAAAAGATCTGGCATCA
CACTTTCTACAACGAACTCCGTGTTGCACCAGAAGAGCACCCAGTTCTCCTTACTGAGGC
CCCACTTAACCCAAAAGATAACCGTAAAAAGATGACCCAAATGATGTTCGAAACCTTCAA
CACCCCCGCCATGTACGTCGCCATCCAAGCTCTGCTTTCATTGTACGGTGCTGGTCGTAT
CACAGGTGTTGTTTGCGGCAGTGGTGATGGTGTTTCCCACACCGTTCCAATCTACGAAGC
CGAGAGTGAAATTGTTCGCGAATTAAAAGAAAAAATTTGCTACGTTGCTCTTGATTTTGA
ACAAGAAATGCAGAAGGTTACAAACAGTCACTCACTTGAAAAATGGCACGAGCTTCCTGA
CGGACAGGTGCGTTTCATTTATAATGCCAATAACTCCATCATGAAGTGTGATGTTGACAT
CCGTAAGAACTTGTACGCCAACGTTGTTCTTTCTGGTGGTTCCACTATTAAGATCATTGC
CCCAGCAGAGAGAAAATACTCCGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCAC
CTTCCAACAGATGTGGATCAGCAAACAAGAATACGACGAGTCCGGCCCATCCATTGTACA
CCGGAAATGCTTCTAAATA
| PANTHER |
Actin (IPR004000) - T[2-160] 9.7E-160 - T[160-208] 9.7E-160 - T[210-236] 9.7E-160 - T[236-283] 9.7E-160 |
| Pfam |
Actin (IPR004000) - T[5-159] 2.2E-59 - T[235-284] 2.8E-22 |
| SMART |
Actin (IPR004000) - T[6-284] 4.4E-118 |
| PRINTS |
Actin (IPR004000) - T[27-36] 7.3E-32 - T[76-94] 7.3E-32 - T[107-120] 7.3E-32 - T[132-151] 7.3E-32 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[45-55] . - T[265-273] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[96-108] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 65.067 % | 468 | 3.48E-167 |
| ACTB_HUMAN | 65.067 % | 470 | 4.11E-168 |
| ACTA_HUMAN | 62.634 % | 447 | 3.56E-159 |