- Clone 'cien89295' >
- Clone 'cima817439' >
- Transcript 'KH2012:KH.L154.43.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.43.v1.A.SL1-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [197,007 / 198,718]
Amino acid sequence
Length: 378
>KH.L154.43.v1.A.SL1-1
KLSMDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGQPRHQGVMVGMGQKDTYVGDE
AQSKRGILTLKYPIEHGIVTNWDQMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
KMTQIMFESFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIR
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLTYVALDFEQEMQTAASSSSLE
KSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANT
VLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,348
>KH2012:KH.L154.43.v1.A.SL1-1
TCGAATAGCATTTGAAAACTTAGCATGGACGAAGATGTTGCCGCACTCGTAGTTGACAAT
GGATCCGGTATGTGCAAGGCCGGTTTCGCCGGAGACGACGCACCACGTGCCGTCTTCCCA
TCCATCGTAGGACAACCCCGTCACCAGGGTGTCATGGTCGGTATGGGACAAAAAGATACC
TATGTTGGAGACGAAGCCCAGAGCAAGAGAGGTATCCTTACTCTGAAATACCCAATTGAG
CACGGTATCGTCACCAACTGGGACCAAATGGAAAAAATCTGGCATCACACTTTCTACAAC
GAACTCCGTGTCGCACCAGAAGAGCACCCAGTTCTTCTTACTGAGGCCCCACTTAACCCA
AAAGCTAACCGTGAAAAGATGACCCAAATCATGTTCGAAAGCTTCAACACCCCCGCTATG
TACGTCGGCATCCAGGCCGTGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATCGTT
TTGGACAGCGGAGACGGTGTTTCCCACACCGTCCCAATCTATGAGGGTTACGCCCTTCCC
CATGCAATTATTCGTCTTGACTTGGCCGGACGAGATCTTACCGATTACTTGATGAAGATC
TTGACCGAGAGAGGTTATTCCTTCACCACCACTGCCGAGCGAGAAATCGTTCGTGACATG
AAGGAAAAACTTACTTATGTTGCTCTTGACTTCGAGCAAGAAATGCAAACCGCTGCCAGC
AGCAGCTCACTTGAAAAGAGTTACGAACTTCCTGACGGACAGGTAATTACAATCGGAAAC
GAACGATTCCGTTGCCCGGAAACGCTTTTCCAACCCGCCTTTATTGGTATGGAATCTGCT
GGTATCCACGAGACCACCTACAACTCCATCATGAAGTGCGATGTTGACATCCGTAAGGAC
TTGTACGCCAACACCGTTCTCTCTGGAGGTTCCACTATGTTCCCTGGAATCGCCGACAGA
ATGCAAAAGGAAATTTCTGCTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCA
CCAGAGAGGAAATACTCCGTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTC
CAACAGATGTGGATCAGCAAACAAGAATACGACGAGTCCGGCCCATCCATTGTCCACCGA
AAGTGTTTTTAAACACCCTCTTTATACTTTTCTGTTAGCCGTTTTAATTGCATTTGAATA
TATTATACTTATATATATATATATAATTTATACCTGGTTATTACAAACTCCCATAAATAT
ACACAGATCAGTGTACGGTTCACTTTGCCGTCACAGTATATACAATAGACGTATTATAAA
TAATGAAGCGTTGCAACACAAAATAAAC
| PANTHER |
Actin (IPR004000) - T[2-377] 8.9E-267 |
| Pfam |
Actin (IPR004000) - T[6-378] 7.9E-150 |
| SMART |
Actin (IPR004000) - T[8-378] 2.9E-238 |
| PRINTS |
Actin (IPR004000) - T[29-38] 2.4E-56 - T[52-63] 2.4E-56 - T[64-86] 2.4E-56 - T[118-131] 2.4E-56 - T[143-162] 2.4E-56 - T[239-255] 2.4E-56 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 93.6 % | 749 | 0 |
| ACTB_HUMAN | 94.133 % | 751 | 0 |
| ACTA_HUMAN | 91.979 % | 735 | 0 |