- Transcript 'Cisavi.CG.ENS81.R90....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L154.44.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.44.v1.A.SL2-1
Possible name(s)
C6; C8B; C9
Gene model
Location
KhL154 [304,250 / 309,068]
Amino acid sequence
Length: 570
>KH.L154.44.v1.A.SL2-1
GMRLLFAVIAVLASVLLFCESGEAWWWSRRRAVSCKVSSWGPWAKCSKTCGGGKAIRSRY
IKRNSAHGGTRCPTLHQTRPCYTQRCPWPITCKWSAWTAWSSCDPCFPGARSKFRTITTP
AMFNGAECTGSRALTDFSCTIKKACITKTCPATKFSCLDGLGCISKKLRCNGDNDCADRS
DEKSCSKGTIHLPCGNKKYKGIPNIDIAGAGFDLIKGVAEGKILDNQKYDGRCSTVKSGD
IGERFRKPANVQFYRFQARTHSSFYVKSYQSAKAYMKDLRASTARKLSAGVSYTDPSLVS
VSMKVGNSNSRKSRLAVTFGTNFDSKFFTVYSTVQVAQFRMVRHNLLLSYEFRRRLKQLP
DDFDYTKYAQIISDFGTHFYSWGVLGGRYEYVYRYSKRDLRRSRLTDHQQKSCLSTEAGI
SFLGSGGSIGSSNCKTNGLSKKHGGSFTRSATNAISNVIGGKSDKAASLSFFSGKTPNKS
NYNEWVKTVKHHPAIIDYKLSPISSAVPLSMLAIRKNLERALVLYLKEYDYSKCKGKCAH
GATVVVKDKGKLCQCLCPANYGGIDCHVRA
Nucleotide sequence
Length: 1,853
>KH2012:KH.L154.44.v1.A.SL2-1
TAGGCATGCGATTGTTGTTTGCAGTGATTGCTGTTTTAGCATCAGTATTGCTGTTCTGTG
AGAGTGGAGAAGCATGGTGGTGGAGTAGAAGAAGGGCTGTATCTTGCAAAGTATCTAGTT
GGGGTCCTTGGGCTAAATGTTCCAAGACATGTGGTGGGGGGAAAGCAATTAGATCAAGGT
ACATTAAACGAAACTCAGCTCATGGTGGCACTAGGTGTCCTACTCTACATCAAACAAGAC
CTTGCTATACTCAAAGGTGTCCATGGCCCATTACATGTAAATGGAGTGCATGGACTGCAT
GGTCAAGCTGTGATCCTTGTTTTCCAGGAGCAAGGAGCAAATTCCGAACTATTACAACAC
CAGCAATGTTCAATGGGGCAGAGTGTACTGGATCTAGAGCTCTTACAGATTTTTCCTGTA
CAATAAAAAAGGCTTGCATAACAAAAACTTGTCCAGCTACCAAGTTTTCTTGCCTTGATG
GTCTTGGTTGTATTTCTAAAAAACTTCGCTGCAATGGTGACAATGACTGCGCTGACCGCT
CCGATGAAAAAAGCTGTTCTAAGGGCACCATTCATTTACCTTGTGGAAACAAAAAATACA
AAGGCATTCCAAACATTGATATCGCTGGAGCTGGGTTCGACCTCATAAAAGGGGTAGCAG
AAGGCAAAATCTTGGATAATCAAAAATATGATGGACGATGCTCAACCGTGAAAAGTGGTG
ACATAGGAGAACGCTTTAGAAAACCAGCAAATGTTCAATTTTATCGGTTTCAGGCACGAA
CACATTCATCCTTTTACGTAAAGTCCTATCAATCAGCAAAGGCCTACATGAAAGATTTAC
GAGCATCCACTGCACGTAAACTTAGCGCTGGTGTCTCATACACAGATCCATCTCTAGTTA
GTGTATCCATGAAGGTTGGTAACTCCAACAGTCGCAAGTCAAGATTAGCGGTTACTTTTG
GAACAAACTTTGATTCCAAGTTTTTTACAGTATATAGCACTGTACAAGTTGCACAATTTA
GAATGGTTCGTCATAATCTTCTCCTTTCATACGAGTTCCGACGACGATTGAAGCAACTGC
CAGATGATTTTGATTACACGAAATATGCTCAAATAATTTCTGACTTTGGCACCCATTTCT
ACTCATGGGGCGTTCTGGGTGGTAGGTATGAGTATGTGTACCGGTATTCCAAGAGAGATC
TACGTAGGTCAAGACTCACAGACCATCAGCAAAAATCTTGTTTGTCAACTGAAGCTGGCA
TATCTTTTCTCGGCTCTGGCGGCAGTATTGGTTCATCCAACTGTAAAACAAATGGGCTGT
CAAAAAAACATGGAGGAAGTTTCACTCGATCTGCTACCAATGCTATTTCTAATGTGATTG
GTGGTAAATCCGACAAAGCGGCTTCTCTAAGTTTTTTTTCTGGAAAAACACCGAACAAGT
CAAATTATAATGAATGGGTTAAGACAGTTAAACACCATCCTGCAATAATTGATTATAAGC
TCTCTCCAATATCATCAGCTGTACCACTTTCAATGTTGGCGATTAGAAAAAACTTAGAAC
GTGCTTTGGTTCTCTATTTGAAGGAGTATGACTACTCCAAGTGTAAGGGTAAATGTGCCC
ATGGTGCAACAGTGGTCGTGAAGGATAAAGGAAAGCTCTGCCAGTGTCTTTGCCCTGCCA
ACTATGGTGGCATTGATTGCCATGTTCGTGCATAAAGCAATGTTTTTATTGTTATATTTT
TGTTCATTAAGTGGTGAAAGAAAAAAATGCATTAATCAGAAAGTATTTATTGCAATCATT
TGCTTCGGGATTATAACATTAACAAGAAATAAATATACCAACAAAATAATATA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[33-81] 9.1E-14 - T[91-139] 3.5E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[33-83] 2.75E-11 - T[91-131] 3.01E-6 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[34-87] 12.395 - T[91-151] 9.389 |
| SMART |
TSP1_rpt (IPR000884) - T[37-87] 1.2E-13 - T[94-151] 2.2E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[38-86] 1.1E-10 - T[95-145] 0.0046 |
| PRINTS |
MAC_perforin (IPR001862) - T[112-128] 6.1E-22 - T[156-176] 6.1E-22 - T[357-379] 6.1E-22 - T[484-503] 6.1E-22 - T[535-555] 6.1E-22 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[144-185] 1.57E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[148-185] 1.4E-11 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[149-187] 1.4E-12 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[149-186] 12.413 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[150-185] 2.8339E-10 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[163-185] . |
| ProSiteProfiles |
MACPF (IPR020864) - T[190-533] 30.482 |
| Pfam |
MACPF (IPR020864) - T[324-525] 3.4E-37 |
| SMART |
MACPF (IPR020864) - T[326-527] 3.2E-31 |
| ProSitePatterns |
MACPF_CS (IPR020863) - T[368-379] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[555-566] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO6_HUMAN | 31.876 % | 268 | 2.03E-79 |
| CO8B_HUMAN | 27.846 % | 212 | 2.62E-61 |
| CO9_HUMAN | 26.99 % | 199 | 1.46E-56 |