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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.26.v1.A...'
  2. Transcript 'KH2012:KH.L169.1.v3....'

Transcript Model

Transcript Id

KH2012:KH.L169.1.v3.A.SL1-1

Possible name(s)

SMCHD1

Location

KhL169 [33,657 / 44,237]

Sequences

Amino acid sequence

Length: 449

>KH.L169.1.v3.A.SL1-1
LSCKLQSAYVIMDDVEDAFVFVYDRRRGKNEERRKIHIGGVFSFDVFLEKVLDVFDLASD
DEFIVTTTGREEINDDDTFVTLIESGDTLYLLQYVDQPLEAPVAEHIEYQPHYDTLIKSG
IYEYYASEGNMNPLPFAFAELIDNALAATARNVGPRIIELSLHFNTSTAEHMLCVYDNGQ
GMSSRQLNNWAIYRLSKFNRKDRRDIGEHIPYHDDENLATPKSLNSDISWFGVGGKQAIF
FIGNSTRIITKQRNSCDVHEFTMSKNEFKRKEKNKEAIFAGYIRNRTFGDSSHIAHSDDV
IRDFINSENDDSFTRVIVSGISEHHTHFMKHGFDIWNRQLAHIYHYYIHGPEGNTSMSRN
RKNIGVSDVNILVTLHENGQKILSTNLRDIEDDLETKYIRTSANTFEFVAKSDGENGGIV
EGMIRYHPFLYDRETYPIDSTQGESFKYN

Nucleotide sequence

Length: 1,350

>KH2012:KH.L169.1.v3.A.SL1-1
CTGTCGTGCAAATTACAGTCTGCTTATGTGATTATGGATGACGTAGAAGATGCTTTCGTT
TTCGTTTATGATCGCAGAAGGGGCAAAAATGAAGAGAGGCGAAAAATTCACATTGGTGGT
GTGTTTTCTTTCGACGTGTTCTTGGAAAAAGTTTTAGATGTGTTTGACCTTGCTTCTGAT
GATGAGTTTATTGTAACAACAACTGGACGAGAAGAAATAAATGATGACGATACTTTCGTG
ACACTTATTGAGAGTGGGGACACGTTATATTTACTACAATATGTAGACCAGCCATTAGAG
GCACCTGTTGCAGAACACATCGAGTACCAGCCTCATTATGATACTTTAATCAAAAGTGGA
ATATACGAGTATTATGCAAGTGAAGGCAACATGAACCCATTACCTTTTGCATTCGCTGAG
CTAATAGACAATGCTTTGGCTGCTACAGCCAGGAATGTTGGTCCACGAATAATTGAATTA
AGTTTGCATTTTAACACCTCAACTGCCGAGCATATGCTATGCGTATATGACAACGGACAA
GGCATGTCATCTCGACAACTCAACAATTGGGCGATTTATCGACTTTCGAAATTTAATCGT
AAAGATCGAAGGGATATTGGAGAGCATATCCCATATCATGATGATGAAAACTTAGCTACC
CCAAAATCGCTCAACAGCGACATCTCCTGGTTCGGTGTTGGTGGAAAACAAGCAATATTT
TTCATCGGAAATTCAACACGGATAATAACAAAACAAAGAAATTCGTGCGACGTGCATGAG
TTCACAATGTCCAAAAATGAATTCAAAAGAAAGGAGAAAAACAAGGAAGCAATTTTCGCT
GGCTACATTCGGAATAGAACGTTTGGAGACAGTTCACACATCGCACATTCGGATGATGTT
ATTCGGGATTTTATTAACTCGGAAAATGATGATAGTTTTACTCGTGTCATCGTGTCTGGT
ATATCGGAACATCACACGCATTTCATGAAGCATGGATTTGATATATGGAATAGACAACTT
GCACACATATACCATTACTATATACATGGGCCCGAAGGCAACACATCGATGTCAAGAAAC
AGGAAAAATATTGGGGTTTCTGATGTTAATATTTTGGTCACTCTGCACGAAAACGGGCAG
AAAATTTTGTCGACGAACCTTCGTGATATAGAAGATGACCTCGAGACGAAATACATTCGG
ACCTCCGCGAATACTTTTGAGTTTGTTGCCAAATCTGATGGAGAAAATGGTGGCATAGTG
GAGGGAATGATCAGATATCATCCATTCTTATATGACAGAGAGACTTATCCTATTGACAGC
ACTCAAGGTGAGTCTTTTAAATATAATTAA

InterProScan

SUPERFAMILY
HATPase_C_sf (IPR036890) - T[104-261] 1.7E-9
Gene3D
HATPase_C_sf (IPR036890) - T[104-336] 2.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMHD1_HUMAN 48.235 % 407 7.74E-128