Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA102YD11'
  2. Transcript 'KH2012:KH.L170.28.v2...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v2.A.nonSL21-1

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [99,118 / 107,488]

Sequences

Amino acid sequence

Length: 766

>KH.L170.28.v2.A.nonSL21-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG

Nucleotide sequence

Length: 2,935

>KH2012:KH.L170.28.v2.A.nonSL21-1
AAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGC
CGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCAC
TGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTA
TATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACA
CCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTA
TCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCA
ACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACA
AACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGC
AATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTAC
ATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAA
AGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAAC
AGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAA
ACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAA
AGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGC
ACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGA
TTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGA
TTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGA
TGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCA
GGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGG
TGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGC
CTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGT
ACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAAT
CAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGA
TTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGA
ATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCT
TTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACA
AAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCA
ACAGAAGAAGAGGATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAG
GCTTTATGAGCAAGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGA
AGTTTCATATTGTCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAA
ACCACATTTGAAATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACG
GGATGACCAGCTTATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGA
GGCAGTACAAAGTACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAAT
TCATGAACAAGAGATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACC
TCAGCGATTGATCACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCAC
TGGTGACCTGCATGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTT
GAACAGGGTGGCTGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGT
GATGAAAATCATGGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGT
CACCATTCGCATCACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGCTA
AAGTGACCCCATACCATTCTTGCCTTGTGATTTGTCGGATCTTTAAAGATTTTGCAACTC
GCTACAATCAGTTGGTTCCTTTGAAAAGTTGGGCGATTGAGCTTCTTACTGAGCGTTCCT
ACACAAGTGCGACGTCAACCTTGTCTCCAACAAGTTGCTTACAGCGCGTCCTTGAAGTTC
TTTCCATGGGTGTTTTGCTGCCTGATGGTCCTGGTATTCGAGATCCTTGTGAAAAAGAAC
CCACAGATGCTGCTGGTAACTTAAGTCTCCAACAAAGGGAAGACATTACAACATTGGCTC
AGCGGCTTTTGCGATTGGTAACTTTTGGCAAAATGTTTAAAATTCTTGACCTTAAATATG
AGCCAAAGCCGCAAGTGCAAAAACGAAGTGCAGAAAATGGGGAGTTTGACAATACAGGAG
TAAAGAAGATTAAAGTTGAAATGCATTAATTTCACACATCTGCTTCAATTTAACTGATGT
GTAGTAAATTTGACAATTTTGAGAACTGTTCTCATTCTGAATTGATATTATTTCAAATTG
CGCAAGTAACACGAGCTTTGCATGGAAAATAAAGCCAAATTCGTTATAGTTGCAA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-766] 29.801
Pfam
DZF_dom (IPR006561) - T[676-760] 8.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.237 % 194 1.14E-51
STRBP_HUMAN 39.157 % 115 1.27E-26
ZFR_HUMAN 36.916 % 228 6.68E-63