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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'
  2. Transcript 'KH2012:KH.C1.1144.v1...'
  3. Transcript 'KH2012:KH.L170.28.v3...'
  4. Transcript 'KH2012:KH.L170.28.v2...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v2.A.nonSL22-1

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [99,118 / 107,482]

Sequences

Amino acid sequence

Length: 766

>KH.L170.28.v2.A.nonSL22-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG

Nucleotide sequence

Length: 2,929

>KH2012:KH.L170.28.v2.A.nonSL22-1
ATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAA
TTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAA
CTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCA
ACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAAC
TGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAG
TCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAG
CAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAA
CACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCA
GATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAA
TTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCT
CATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGG
AGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAA
GAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATA
TCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGG
TAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGT
AGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTG
TGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAA
GTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAAC
CAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAA
TACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCC
ACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCT
AATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGA
AGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGT
AACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGA
GTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTA
TAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAG
CTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAA
GAAGAGGATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTA
TGAGCAAGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTC
ATATTGTCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACA
TTTGAAATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGA
CCAGCTTATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGT
ACAAAGTACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGA
ACAAGAGATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCG
ATTGATCACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGA
CCTGCATGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAG
GGTGGCTGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAA
AATCATGGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCAT
TCGCATCACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGCTAAAGTGA
CCCCATACCATTCTTGCCTTGTGATTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACA
ATCAGTTGGTTCCTTTGAAAAGTTGGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAA
GTGCGACGTCAACCTTGTCTCCAACAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCA
TGGGTGTTTTGCTGCCTGATGGTCCTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAG
ATGCTGCTGGTAACTTAAGTCTCCAACAAAGGGAAGACATTACAACATTGGCTCAGCGGC
TTTTGCGATTGGTAACTTTTGGCAAAATGTTTAAAATTCTTGACCTTAAATATGAGCCAA
AGCCGCAAGTGCAAAAACGAAGTGCAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGA
AGATTAAAGTTGAAATGCATTAATTTCACACATCTGCTTCAATTTAACTGATGTGTAGTA
AATTTGACAATTTTGAGAACTGTTCTCATTCTGAATTGATATTATTTCAAATTGCGCAAG
TAACACGAGCTTTGCATGGAAAATAAAGCCAAATTCGTTATAGTTGCAA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-766] 29.801
Pfam
DZF_dom (IPR006561) - T[676-760] 8.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.237 % 194 1.14E-51
STRBP_HUMAN 39.157 % 115 1.27E-26
ZFR_HUMAN 36.916 % 228 6.68E-63