- Transcript 'Boleac.CG.SB_v3.S59....' >
- Transcript 'KH2012:KH.C1.883.v1....' >
- Clone 'cilv040i21' >
- Transcript 'KH2012:KH.L170.28.v2...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v2.A.nonSL25-1
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [99,118 / 107,458]
Amino acid sequence
Length: 766
>KH.L170.28.v2.A.nonSL25-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG
Nucleotide sequence
Length: 2,905
>KH2012:KH.L170.28.v2.A.nonSL25-1
GTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTCACTTCAGGAGG
GAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAATTATGGAATACA
ACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCCATCCAGCCACC
ACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGAGCATCTGTCCC
ATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAACAACAACAACA
ACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAATATTATCAACA
ACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCATCAACTGCCTA
TTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCC
AGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGACAGAGCCAACA
ATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTA
CCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGC
TGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCC
CAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAA
GAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTACAGGCAAACCTA
TGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAA
GAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACT
AATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCAACAACAAGAT
GCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAA
AGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGT
AAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGCACCTCTACCCC
TACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCC
TGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGATTCTGCAGAAAT
AGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGGACGGACGGTCG
GGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGC
TCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATAT
AGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATGAAAATGAGAAT
GGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGAATGGCAGATGGA
GATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCTTTACTATCGATA
CAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTTATCTGGCACCCC
TGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTTTCGGCCAAATGA
TGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCATGAAGAAGCATAA
GAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGTGCAGACGGTAGA
AACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAAAGTATTTGCTGC
CTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGCTGTTGTAAGAGT
CGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGCATTGGTCCTTAT
GTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCATCTACCCAAGCA
ACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGAAGACGCTGCTAT
TCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCTTACATCCACATC
AATGAGAAACCCATGTCCGGATGCAGGCTAAAGTGACCCCATACCATTCTTGCCTTGTGA
TTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGTTCCTTTGAAAAGTT
GGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTCAACCTTGTCTCCAA
CAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTTGCTGCCTGATGGTC
CTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGGTAACTTAAGTCTCC
AACAAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATTGGTAACTTTTGGCA
AAATGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGTGCAAAAACGAAGTG
CAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGTTGAAATGCATTAAT
TTCACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAATTTTGAGAACTGTT
CTCATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGCTTTGCATGGAAAAT
AAAGCCAAATTCGTTATAGTTGCAA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-766] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 8.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.237 % | 194 | 1.14E-51 |
| STRBP_HUMAN | 39.157 % | 115 | 1.27E-26 |
| ZFR_HUMAN | 36.916 % | 228 | 6.68E-63 |