- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C5.486.v1....' >
- Clone 'cima882417' >
- Clone 'cien201509' >
- Transcript 'KH2012:KH.L170.28.v2...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v2.A.nonSL3-1
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [99,118 / 107,536]
Amino acid sequence
Length: 766
>KH.L170.28.v2.A.nonSL3-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG
Nucleotide sequence
Length: 2,983
>KH2012:KH.L170.28.v2.A.nonSL3-1
AATTCCTCATTCCTGCATGCGCTGTTGTCGGCGAGTGTATATAATGCGAAAATCATTGTT
TCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTT
CGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGG
TGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACC
AAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATC
TGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACA
ACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCA
ACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGC
CAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAA
ACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAA
CCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAA
CGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGG
AGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTT
ACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTA
TGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCA
CCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAA
GGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTA
CCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGC
GGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGT
AGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCT
TCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCAT
CACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCC
CCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAAT
CAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACA
AGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAA
TGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAA
AAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGAT
GGAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAG
GATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCA
AGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTG
TCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAA
ATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCT
TATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAG
TACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGA
GATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGAT
CACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCA
TGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGC
TGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCAT
GGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCAT
CACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGCTAAAGTGACCCCAT
ACCATTCTTGCCTTGTGATTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGT
TGGTTCCTTTGAAAAGTTGGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGA
CGTCAACCTTGTCTCCAACAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTG
TTTTGCTGCCTGATGGTCCTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTG
CTGGTAACTTAAGTCTCCAACAAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGC
GATTGGTAACTTTTGGCAAAATGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGC
AAGTGCAAAAACGAAGTGCAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTA
AAGTTGAAATGCATTAATTTCACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTG
ACAATTTTGAGAACTGTTCTCATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACAC
GAGCTTTGCATGGAAAATAAAGCCAAATTCGTTATAGTTGCAA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-766] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 8.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.237 % | 194 | 1.14E-51 |
| STRBP_HUMAN | 39.157 % | 115 | 1.27E-26 |
| ZFR_HUMAN | 36.916 % | 228 | 6.68E-63 |