- Transcript 'KH2012:KH.L170.28.v2...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v2.A.nonSL5-1
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [99,118 / 107,472]
Amino acid sequence
Length: 766
>KH.L170.28.v2.A.nonSL5-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG
Nucleotide sequence
Length: 2,919
>KH2012:KH.L170.28.v2.A.nonSL5-1
ACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGA
TTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGT
AATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGA
GCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGA
GGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAG
CAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACAT
CAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAAT
TCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAG
CCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAA
CGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCT
GCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCA
TCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAG
CAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCT
TGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCG
TACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGA
AGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTG
GTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCA
ACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGC
ATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCAT
TTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACC
AGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCG
CCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAA
GATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTA
TGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGAT
CCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAA
GTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAA
ATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATG
GAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAG
CTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGT
TTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTT
TTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATC
ATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACT
GTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATG
AAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACT
GCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTA
GCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGT
CATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTT
GAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACT
CTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGCTAAAGTGACCCCATACCA
TTCTTGCCTTGTGATTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGT
TCCTTTGAAAAGTTGGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTC
AACCTTGTCTCCAACAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTT
GCTGCCTGATGGTCCTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGG
TAACTTAAGTCTCCAACAAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATT
GGTAACTTTTGGCAAAATGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGT
GCAAAAACGAAGTGCAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGT
TGAAATGCATTAATTTCACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAA
TTTTGAGAACTGTTCTCATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGC
TTTGCATGGAAAATAAAGCCAAATTCGTTATAGTTGCAA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-766] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 8.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.237 % | 194 | 1.14E-51 |
| STRBP_HUMAN | 39.157 % | 115 | 1.27E-26 |
| ZFR_HUMAN | 36.916 % | 228 | 6.68E-63 |