- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.L170.28.v2...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v2.A.nonSL6-1
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [99,118 / 107,469]
Amino acid sequence
Length: 766
>KH.L170.28.v2.A.nonSL6-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAG
Nucleotide sequence
Length: 2,916
>KH2012:KH.L170.28.v2.A.nonSL6-1
CTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTC
ACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAAT
TATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCC
ATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGA
GCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAA
CAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAA
TATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCA
TCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCA
GCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGA
CAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCT
TCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCT
AATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAA
GTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGG
TTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTAC
AGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGC
GCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTT
CGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACC
AACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATC
GCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTA
TCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGC
ACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCC
CCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGAT
TCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGG
ACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCG
TCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTT
GATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATG
AAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGAA
TGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCTT
TACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTTA
TCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTTT
CGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCATG
AAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGTG
CAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAAA
GTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGCT
GTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGCA
TTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCAT
CTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGAA
GACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCTT
ACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGCTAAAGTGACCCCATACCATTC
TTGCCTTGTGATTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGTTCC
TTTGAAAAGTTGGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTCAAC
CTTGTCTCCAACAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTTGCT
GCCTGATGGTCCTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGGTAA
CTTAAGTCTCCAACAAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATTGGT
AACTTTTGGCAAAATGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGTGCA
AAAACGAAGTGCAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGTTGA
AATGCATTAATTTCACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAATTT
TGAGAACTGTTCTCATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGCTTT
GCATGGAAAATAAAGCCAAATTCGTTATAGTTGCAA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.53E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-766] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 8.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.237 % | 194 | 1.14E-51 |
| STRBP_HUMAN | 39.157 % | 115 | 1.27E-26 |
| ZFR_HUMAN | 36.916 % | 228 | 6.68E-63 |