Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 746

>KH.L170.28.v3.A.nonSL10-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK

Nucleotide sequence

Length: 2,436

>KH2012:KH.L170.28.v3.A.nonSL10-2
GAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGG
CCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCA
CTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACT
ATATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGAC
ACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTT
ATCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTC
AACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACAC
AAACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCG
CAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTA
CATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGA
AAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAA
CAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGA
AACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCA
AAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTG
CACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATG
ATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGG
ATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAG
ATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACC
AGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTG
GTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTG
CCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATG
TACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAA
TCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGG
ATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTG
AATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGC
TTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAAC
AAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAGCTTTATGAGCAAGAGC
TTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTT
TATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTT
TTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCA
TGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTG
TGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGA
AAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTG
CTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAG
CATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTC
ATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTG
AAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTC
TTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAAAAAT
AAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTAAAAG
AAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGTATCT
TAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA

InterProScan

ProSiteProfiles	dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART	dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam	dsRBD_dom (IPR014720) - T[250-312] 2.2E-7
SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles	DZF_dom (IPR006561) - T[568-746] 29.801
Pfam	DZF_dom (IPR006561) - T[650-734] 6.5E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ZFR2_HUMAN	38.679 %	199	2.22E-53
STRBP_HUMAN	39.157 %	116	8.27E-27
ZFR_HUMAN	36.406 %	230	7.9E-64

Transcript Model

Transcript Id

Possible name(s)

Gene model

Location

Amino acid sequence

Nucleotide sequence