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  1. Clone 'cima878598' > 
  2. Transcript 'KH2012:KH.L22.44.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S384...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'KH2012:KH.L170.28.v3...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v3.A.nonSL12-2

Possible name(s)

STRBP; ZFR; ZFR2

Gene model

KH2012:KH.L170.28

Location

KhL170 [100,847 / 107,510]

Sequences

Amino acid sequence

Length: 746

>KH.L170.28.v3.A.nonSL12-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK

Nucleotide sequence

Length: 2,457

>KH2012:KH.L170.28.v3.A.nonSL12-2
GTCGGCGAGTGTATATAATGCGAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTAT
AGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATC
AACAATATAACATTGGTACCACTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGC
AGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCCATCCAGCCACCACAACAAC
AAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACAT
CTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAACAACAACAACAACAAACTG
GATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAATATTATCAACAACAACAAC
AACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCATCAACTGCCTATTTCACAA
ACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATA
ACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGACAGAGCCAACAATCACAAC
AAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAAC
ATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATA
TAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAAC
CAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTC
GTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCG
AGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATT
CGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAG
AATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTT
CATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTAT
CTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAG
TTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCA
AAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGA
AACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTA
AAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAA
GGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATA
TAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTG
AAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAA
AAAAGCTTTATGAGCAAGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAG
AAGAAGTTTCATATTGTCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGA
ATAAACCACATTTGAAATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTT
CACGGGATGACCAGCTTATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAAC
TGGAGGCAGTACAAAGTACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTA
CAATTCATGAACAAGAGATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGC
AACCTCAGCGATTGATCACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTAC
TCACTGGTGACCTGCATGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAA
TGTTGAACAGGGTGGCTGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACT
TTGTGATGAAAATCATGGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAG
TGGTCACCATTCGCATCACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAG
GTATGGTCCCTAAGAAAAAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGG
AATTACAGTCATTTTTAAAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTA
TCCGGTATAGATTTCGTATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 2.2E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[568-746] 29.801
Pfam
DZF_dom (IPR006561) - T[650-734] 6.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 38.679 % 199 2.22E-53
STRBP_HUMAN 39.157 % 116 8.27E-27
ZFR_HUMAN 36.406 % 230 7.9E-64





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