- Transcript 'Mooccu.CG.ELv1_2.S55...' >
- Transcript 'KH2012:KH.L112.12.v1...' >
- Transcript 'KH2012:KH.C1.940.v1....' >
- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'KH2012:KH.L170.28.v3...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v3.A.nonSL15-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,494]
Amino acid sequence
Length: 746
>KH.L170.28.v3.A.nonSL15-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,441
>KH2012:KH.L170.28.v3.A.nonSL15-2
AATGCGAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAA
AATGGCCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGG
TACCACTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAA
TAACTATATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTA
TGGACACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATA
CAGTTATCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGC
TGTTCAACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACCCACC
CACACAAACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAA
TAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCC
TGTTACATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTA
TGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGG
TGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTA
CTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGA
AGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACAT
TACTGCACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGG
ATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGC
GTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAAT
TAGAGATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAG
TTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTT
TGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCC
CACTGCCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGC
AAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGA
AACAATCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGG
GGAGGATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATT
ATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCA
CAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCC
TAAACAAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAGCTTTATGAGCA
AGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTG
TCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAA
ATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCT
TATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAG
TACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGA
GATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGAT
CACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCA
TGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGC
TGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCAT
GGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCAT
CACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAA
AAAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTT
AAAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCG
TATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.2E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[568-746] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[650-734] 6.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 38.679 % | 199 | 2.22E-53 |
| STRBP_HUMAN | 39.157 % | 116 | 8.27E-27 |
| ZFR_HUMAN | 36.406 % | 230 | 7.9E-64 |